Clone BS23758 Report

Search the DGRC for BS23758

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:237
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG2898-RA
Protein status:BS23758.pep: full length peptide match
Sequenced Size:1088

Clone Sequence Records

BS23758.complete Sequence

1088 bp assembled on 2011-03-14

GenBank Submission: KX804886

> BS23758.complete
GAAGTTATCAGTCGACATGTGCTGTGCACCGATGTGTGGGCCCTCGGTCT
GCGGGCCTTCGATGTGCAACCCGCCCGCTTGTCGTGTGCCACTGGAGCCA
CTGCATCCGTCAACAGTCTACCACTGCTGTCCGTCCACGAAGTGCACGCT
GTGCTGTAATAACGAATCAAAACACGAGTGCCACTGCACCTGCCAGCGCA
ACAAGCACATCGTGGAGGCGTTCAGCTGCCTGTTCCGGGTTAGCAAGTTC
CAGATCCTGACCACCCTCTTTCTACTGGCCTATCATGAGAGCAGACCGCT
GCCGCGCTTTCCGCGCGATCGCAACTGGTCGGTGATGGAGAACGTGAAGG
CACCGTACTCGGAGTTGCACGACCTGAGGATCTACGACAGCCTGTTCGAT
CGCTGTGGCAACCGCATCGATCCGCTCGACCAAAAGAACACGTACAAGCT
GTTGCGCCTGATCTTTCTCGGTCCAGTGCTGGTGCCCGATCAGCAGGCAC
AGCTACTGGCCATGCTGTACACGCTAAATGCCCATGCCGTCTGTCCCGTG
GATCTCAATGGCCTGCTATCGGTACTGCAGTATGTGAAGCTGGATGAGCT
GGTGTGCGGCATCTTGGAGCAGGACGGACGAGCGAAACGTTTCCACAGCG
GGCGGCAGTGCTTGGAGCTGTGCAATCTCTACCAGAAAGTGGTCGCCACG
GACAAGGATGCGGTTATTAAAAAGCATCGCCGTCGCAAGGAGAAGTCCAA
GAGCAAGGATTCGGAGGCACAGAAGAAGCCGCGTAGAACCATCACCGCGC
AGATATACTGCACGCGTCGCGTTCCGGAGCCCGAGGATGTTAGCTCACGG
ATCGAGACTATCACTCCAATCGTACGCAGTACAGCCACCTCGTTGCGTCG
CTCCTCCAACAAGAAAAGCTGGATGCCGGTCAATCGGAGCAGCATTAATA
ACTCGGAGAAGGGATCTCGCCGGGGTTCGCGCAATCTCGCGGGTTCACCG
AAGAGAAACAAGCCGGAAGTGTCCAATGTGGGAGTGCGAATGCAGGGCGG
CGACCGCCAAAGAACGAAGTGAAAGCTTTCTAGACCAT

BS23758.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-RA 1056 CG2898-PA 1..1056 17..1072 5280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:29:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-RA 1255 CG2898-RA 125..1181 17..1073 5285 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10375498..10376554 17..1073 5285 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:29:06 has no hits.

BS23758.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-14 09:58:39 Download gff for BS23758.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 125..1179 17..1071 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:26 Download gff for BS23758.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 125..1179 17..1071 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:42 Download gff for BS23758.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 125..1179 17..1071 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:42 Download gff for BS23758.complete
Subject Subject Range Query Range Percent Splice Strand
X 10375498..10376552 17..1071 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:26 Download gff for BS23758.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10269531..10270585 17..1071 100   Plus

BS23758.pep Sequence

Translation from 16 to 1071

> BS23758.pep
MCCAPMCGPSVCGPSMCNPPACRVPLEPLHPSTVYHCCPSTKCTLCCNNE
SKHECHCTCQRNKHIVEAFSCLFRVSKFQILTTLFLLAYHESRPLPRFPR
DRNWSVMENVKAPYSELHDLRIYDSLFDRCGNRIDPLDQKNTYKLLRLIF
LGPVLVPDQQAQLLAMLYTLNAHAVCPVDLNGLLSVLQYVKLDELVCGIL
EQDGRAKRFHSGRQCLELCNLYQKVVATDKDAVIKKHRRRKEKSKSKDSE
AQKKPRRTITAQIYCTRRVPEPEDVSSRIETITPIVRSTATSLRRSSNKK
SWMPVNRSSINNSEKGSRRGSRNLAGSPKRNKPEVSNVGVRMQGGDRQRT
K*

BS23758.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:05:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-PA 351 CG2898-PA 1..351 1..351 1885 100 Plus