BS23761.complete Sequence
1361 bp assembled on 2011-02-16
GenBank Submission: KX800435
> BS23761.complete
GAAGTTATCAGTCGACATGATGAAGCCATCACAATCGCAATTGCATTCGC
AGTCGCAAACACAGTCGCGGCCAAAGTCGCGGCTACAGTCGCGGCCACAG
TCGCGGTCACAGTCGCTGTCACAGTCGCAATGCCACTGGCAGATCCCGGC
GACAAGTACAGCGACCTTGAGCTGGCTGTGCCTACTCCTGCTGCTGCCCT
CTTCCAGGCAGTTCGAAACGGACTGTGGATGTCGTCCGGCGCGTAGAGGT
CCGAGGATCATTGCTGGAGCTGCCACGAATGAGGGCCAGTTCCCCTGGCA
GGCCTCGCTGGAGCTGTTGCACCCCTCGCTCGGATTCCTGGGCCACTGGT
GCGGGGCGGTGCTGATCCACCAGTACTGGATCCTCTCCGCCGCCCACTGT
GTTCACAACGATCTCTTTAACCTGCCCATTCCACCGCTGTGGACGGTGGT
TTTAGGCGAGCACGATCGCGATGTGGAGTCGGGCAACGAGCAGCGTATTC
CCGTCGAGAAGATCGTGATGCACCATCGCTACCACAACTTCAAGCACGAC
GTGGTGCTGATGAAGCTTTCAAAGCCAGCGGATCTCACCAGGGCCTCCAA
TATCCGGCGGATCTGTTTGCCCTTTCTCCTAGCCGAATCGCCGGATCAGG
CCCAGTCAGAGACAGTGTCTCCACCTTCATCGGCCGATGAGGATGTGCTA
ATCCAGCAGCTGGAGCTAGAAGATGTGCCCGAAAAGATCGATAACTTTCT
GCGCAGCGTCCAGAGTCGTCGGCGCTATCGAAATGTCACGGCCCCCAGCA
TGAAGGAACTGATGAACATGAAGATCCTCAGCAGGATGCGTCAAGCGCTG
GCGCAACGCTCCCCGCGCAGCCACAAGCGTTCGCGAAGACGCAACGATAA
GCTAATGAAGCTGGGTCCTCGCCGGGATTCGGATGATTCTGCTGAGCAGA
AGCACCCAAAAGTCAGTGATGAGCCAAAGGAGATTGCCTTTGTGGACTGC
GTTGCCACGGGATGGGGCAAGGCCAACATTAGTGGTGATCTCTCCAATCA
GCTGCTGAAAACACAGGTGCCATTGCACCAGAATGGCAGGTGTAGAGATG
CCTACGGCAGCTTCGTCAACATCCACGGTGGTCACCTGTGCGCCGGCAAG
CTGAACGGGGAGGGCGGCACCTGCGTGGGCGACTCCGGCGGACCGCTGCA
GTGCCGCTTGAGCCGCGACGGGCCCTGGATTCTGGTGGGAGTCACCTCCT
TCGGATCGGGCTGTGCCCTGGAAGGCTTTCCAGACGTCTACACCCGCACC
TCGTACTATATGAAGTGGATTGAGGACACGATCGCCACCCACTGAAAGCT
TTCTAGACCAT
BS23761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14892-RA | 1329 | CG14892-PA | 1..1329 | 17..1345 | 6645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14892-RA | 2200 | CG14892-RA | 685..2014 | 17..1346 | 6650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:45:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16596052..16596734 | 409..1091 | 3415 | 100 | Plus |
| 3R | 32079331 | 3R | 16596795..16597055 | 1086..1346 | 1305 | 100 | Plus |
| 3R | 32079331 | 3R | 16595098..16595302 | 17..221 | 1025 | 100 | Plus |
| 3R | 32079331 | 3R | 16595803..16595990 | 221..408 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:45:21 has no hits.
BS23761.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:18:51 Download gff for
BS23761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14892-RA | 685..2012 | 17..1344 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:56 Download gff for
BS23761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14892-RA | 685..2012 | 17..1344 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:26 Download gff for
BS23761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14892-RA | 685..2012 | 17..1344 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:26 Download gff for
BS23761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16595098..16595302 | 17..221 | 100 | -> | Plus |
| 3R | 16595804..16595990 | 222..408 | 100 | -> | Plus |
| 3R | 16596052..16596732 | 409..1089 | 100 | -> | Plus |
| 3R | 16596799..16597053 | 1090..1344 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:56 Download gff for
BS23761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12420820..12421024 | 17..221 | 100 | -> | Plus |
| arm_3R | 12421526..12421712 | 222..408 | 100 | -> | Plus |
| arm_3R | 12421774..12422454 | 409..1089 | 100 | -> | Plus |
| arm_3R | 12422521..12422775 | 1090..1344 | 100 | | Plus |
BS23761.pep Sequence
Translation from 16 to 1344
> BS23761.pep
MMKPSQSQLHSQSQTQSRPKSRLQSRPQSRSQSLSQSQCHWQIPATSTAT
LSWLCLLLLLPSSRQFETDCGCRPARRGPRIIAGAATNEGQFPWQASLEL
LHPSLGFLGHWCGAVLIHQYWILSAAHCVHNDLFNLPIPPLWTVVLGEHD
RDVESGNEQRIPVEKIVMHHRYHNFKHDVVLMKLSKPADLTRASNIRRIC
LPFLLAESPDQAQSETVSPPSSADEDVLIQQLELEDVPEKIDNFLRSVQS
RRRYRNVTAPSMKELMNMKILSRMRQALAQRSPRSHKRSRRRNDKLMKLG
PRRDSDDSAEQKHPKVSDEPKEIAFVDCVATGWGKANISGDLSNQLLKTQ
VPLHQNGRCRDAYGSFVNIHGGHLCAGKLNGEGGTCVGDSGGPLQCRLSR
DGPWILVGVTSFGSGCALEGFPDVYTRTSYYMKWIEDTIATH*
BS23761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:15:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14892-PA | 442 | CG14892-PA | 1..442 | 1..442 | 2359 | 100 | Plus |
| CG6041-PA | 308 | CG6041-PA | 169..269 | 327..435 | 213 | 41.8 | Plus |
| CG7432-PB | 721 | CG7432-PB | 616..717 | 332..437 | 204 | 39.6 | Plus |
| CG9372-PA | 408 | CG9372-PA | 297..402 | 327..435 | 198 | 34.9 | Plus |
| CG4386-PA | 372 | CG4386-PA | 249..356 | 329..437 | 197 | 39.1 | Plus |
