Clone BS23762 Report

Search the DGRC for BS23762

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:237
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG15525-RA
Protein status:BS23762.pep: full length peptide match
Sequenced Size:518

Clone Sequence Records

BS23762.complete Sequence

518 bp assembled on 2011-01-27

GenBank Submission: KX803915

> BS23762.complete
GAAGTTATCAGTCGACATGGGCATGATGGACAACAATGGCGTCGGCAAGC
TGACACAAGAATCTCTAAAACGCAAGGAGCGTCTGCAAAAACTCCGGGAA
CAAGTGCAAAACAAAGGAGGAGACGCTGCCGAGTCCATTGAAAAGTTACC
CAAACCAGTTTTCCGCAGCTACAAGCCCCAGAATGAGACCACCGATGGCG
AGATTCTAGCACAGGAACCCACGGGCAACATAGAATCAGCTGTGGAGGAT
CAATTGAGTCTGCTCCAGCAGCCCATGGTGATAGATGAGATTGACATAAC
CAACCTGGCTCCCCGAAAACCCGACTGGGATCTGAAGCGGGATGCCAGCA
AAAAGTTGGAGCGACTGGAACGACGTACCCAGAAAGCTATTGCTGAACTC
ATCCGTGAGCGACTGAAACTGAACCAAATGGAGGATATCAGCCAAGCGGT
GAATGTGGCCACGGCTCATGCAGGTGAAAGTGTTCAGGAGGATTATGACT
AGAAGCTTTCTAGACCAT

BS23762.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15525-RA 486 CG15525-PA 1..486 17..502 2430 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15525-RA 654 CG15525-RA 101..589 15..503 2445 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29997026..29997375 503..154 1750 100 Minus
3R 32079331 3R 29997438..29997576 153..15 695 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:57:44 has no hits.

BS23762.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:40 Download gff for BS23762.complete
Subject Subject Range Query Range Percent Splice Strand
CG15525-RA 104..589 17..502 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:10 Download gff for BS23762.complete
Subject Subject Range Query Range Percent Splice Strand
CG15525-RA 103..588 17..502 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:40 Download gff for BS23762.complete
Subject Subject Range Query Range Percent Splice Strand
CG15525-RA 103..588 17..502 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:40 Download gff for BS23762.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29997027..29997375 154..502 100 <- Minus
3R 29997438..29997574 17..153 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:10 Download gff for BS23762.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25822749..25823097 154..502 100 <- Minus
arm_3R 25823160..25823296 17..153 100   Minus

BS23762.pep Sequence

Translation from 16 to 501

> BS23762.pep
MGMMDNNGVGKLTQESLKRKERLQKLREQVQNKGGDAAESIEKLPKPVFR
SYKPQNETTDGEILAQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPR
KPDWDLKRDASKKLERLERRTQKAIAELIRERLKLNQMEDISQAVNVATA
HAGESVQEDYD*

BS23762.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15525-PA 161 CG15525-PA 1..161 1..161 808 100 Plus