BS23768.complete Sequence
1049 bp assembled on 2011-02-07
GenBank Submission: KX803591
> BS23768.complete
GAAGTTATCAGTCGACATGGAAATGCGCGATCGGCTGTACCAAATGATGG
TGAGCCAGAGCTTTATGTCGAGAGGCACGGTGACCGCGAGCATGGCCAAT
TTTGCGATTGGAAATCTTAGAAGTTCCGATGCTGTAGAAAAGAGAGTGAT
CAAAATTCTGCTGGTGATCGAGGAGAAGTATCGGAGTTACTTTGACAGCT
ATAGGAAGGAGCTAGAGCTCCAGAGGATAGCGGCAGAAACACTGCACCAG
CTAATCCAGCGCTACAAGATCACCATGCAGCTGGACACCAGCTGCACATG
TCCGCAGATCTATGATATCGAATCGGATGATGCGATCATCAACAAGTTCT
ACATCCACTATCAGGTGATAGCCAGTTCAAACAAGAATCAGTGTTGGGCC
ATCCAAAGCCTGCGTCCGTATGTGCTTGTCTTTCGCCGTGAATGTGCCAA
GTTGAATAGGAGCGAGGAGAGCCCCTTCATTCTGGGCGATGCCTTCCACA
AGCCCATTCAGTTCTTTATCGACCTGGTGGAGGAGCTGTTCGCCTACTTC
TACAGTGGACACCTTCAGCTGGATTGCGCGGCGCGTCTGTTGGATCCCTT
GGATCTGTACCGAATGGAGTGCTACATGAAGCTATTGGAGCCCAACGAGG
ACTTTGCCGAATACTTTCTGCACAACATAAGCTTCTGCAAATGCATGCGG
CCGCCACCGATGTGTCCGCCGTACGAACACCATCAGAAGATCAAGGATCA
GTCCGACGCATATCTCAGTCATGCCAAGAAGAAGCGATGTGCCAGGCGGT
TTGAGAGAATGGCCCAAAACGAGGCACAGACTGCGAAGCGGGAAAGCGGC
TCAGTGGAACGGAAAATGTCCATTGGCAGCGCGAGGACGACCAGGAGTCT
AAGTCGGGAGGCTTCTGTCGTGGAAGAAGCCGTATCCGTATCCAATCAGC
AACATGAACGCACCCTAAGGGATCAGCTGATGTGCGCCCTTAGCATTTCC
CCCGAAAAAAGGCACGACGCCACCAACCAATGAAAGCTTTCTAGACCAT
BS23768.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:18:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1017 | CG30391-PA | 1..1017 | 17..1033 | 5085 | 100 | Plus |
| CG30393-RA | 1065 | CG30393-PA | 130..683 | 146..699 | 1030 | 79.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:18:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1538 | CG30391-RA | 98..1114 | 17..1033 | 5085 | 100 | Plus |
| CG30393-RA | 1216 | CG30393-RA | 194..747 | 146..699 | 1030 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:18:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21265229..21266245 | 1033..17 | 5085 | 100 | Minus |
| 2R | 25286936 | 2R | 21266833..21267386 | 699..146 | 1030 | 79.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:18:22 has no hits.
BS23768.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-07 13:57:03 Download gff for
BS23768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1113 | 17..1032 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:53:41 Download gff for
BS23768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1113 | 17..1032 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:57:08 Download gff for
BS23768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1113 | 17..1032 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:57:08 Download gff for
BS23768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21265230..21266245 | 17..1032 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:53:41 Download gff for
BS23768.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17152735..17153750 | 17..1032 | 100 | | Minus |
BS23768.pep Sequence
Translation from 16 to 1032
> BS23768.pep
MEMRDRLYQMMVSQSFMSRGTVTASMANFAIGNLRSSDAVEKRVIKILLV
IEEKYRSYFDSYRKELELQRIAAETLHQLIQRYKITMQLDTSCTCPQIYD
IESDDAIINKFYIHYQVIASSNKNQCWAIQSLRPYVLVFRRECAKLNRSE
ESPFILGDAFHKPIQFFIDLVEELFAYFYSGHLQLDCAARLLDPLDLYRM
ECYMKLLEPNEDFAEYFLHNISFCKCMRPPPMCPPYEHHQKIKDQSDAYL
SHAKKKRCARRFERMAQNEAQTAKRESGSVERKMSIGSARTTRSLSREAS
VVEEAVSVSNQQHERTLRDQLMCALSISPEKRHDATNQ*
BS23768.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-PA | 338 | CG30391-PA | 1..338 | 1..338 | 1755 | 100 | Plus |
| CG30393-PA | 354 | CG30393-PA | 1..328 | 1..333 | 927 | 55.2 | Plus |
| CG31910-PA | 262 | CG31910-PA | 39..242 | 34..234 | 325 | 30.9 | Plus |
