BS23770.complete Sequence
710 bp assembled on 2011-01-27
GenBank Submission: KX800283
> BS23770.complete
GAAGTTATCAGTCGACATGGAGGGGAATAGATCCCTTGTAGTGCTGGGCT
TAATACTAATTTTAATACAACTTACAACTCCAACTTCAACTCCAGCTCCA
ACTCCACAGCCTGCTGGAGCCGAAGAAGCTCCAGGAAACAGTACTGCAGA
GGCTTCCAAATCCTCCACAGCGTCTAAGTGCAAGTCAACTGAAATTCTAT
CCGAAAATGGCTGCGTGGATCGCGAAAACTTCCTCAACAAGATCGTGATG
AGATCGTGGAGGGATGAAGGCTTTGAAAAGGCGAAGGCCAGAGCTGGCCT
GGTCGATGGCGTAGAGTGCAGGGATGGGGAGTTGAGGACTGCATTTGGCT
GCTCAAAGCCACTGTACCCACCGCACGTGGACGTAAACCGGGTGCCAGTT
CACCACAGCAGACTAAATGGCGAACGGATTGTTCACGACAAGGGTATTTA
TAAACTCTATCACCACGTGGAAGATGTGGAACAAAAACCGATTCGAAAAC
CTAGAGTGGTAGGACCTCCGATAACTGGAAACAAGCGCCCACGAAAGTAC
GTATTCTTGCCGGGAAGGAGTATTGGAAAGGGACACACATGTCGGGCTAA
TGAGGTCCTGGGAAGAAGGAATCGCTGCATCCATAGGAAACGGTTAGCTG
GCCAACGACAAAATCAAACAATCGAAAACGAACAGAGTCAATAAAAGCTT
TCTAGACCAT
BS23770.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:57:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31418-RA | 678 | CG31418-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
| CG31419-RB | 717 | CG31419-PB | 175..410 | 176..411 | 625 | 84.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31418-RA | 717 | CG31418-RA | 20..698 | 17..695 | 3395 | 100 | Plus |
| CG31419-RB | 774 | CG31419-RB | 194..429 | 176..411 | 625 | 84.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17283814..17284492 | 17..695 | 3395 | 100 | Plus |
| 3R | 32079331 | 3R | 17284841..17285076 | 176..411 | 625 | 84.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:57:15 has no hits.
BS23770.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:39 Download gff for
BS23770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 20..695 | 17..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:58 Download gff for
BS23770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 20..695 | 17..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:28 Download gff for
BS23770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31418-RA | 20..695 | 17..692 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:28 Download gff for
BS23770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17283814..17284489 | 17..692 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:58 Download gff for
BS23770.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13109536..13110211 | 17..692 | 100 | | Plus |
BS23770.pep Sequence
Translation from 16 to 693
> BS23770.pep
MEGNRSLVVLGLILILIQLTTPTSTPAPTPQPAGAEEAPGNSTAEASKSS
TASKCKSTEILSENGCVDRENFLNKIVMRSWRDEGFEKAKARAGLVDGVE
CRDGELRTAFGCSKPLYPPHVDVNRVPVHHSRLNGERIVHDKGIYKLYHH
VEDVEQKPIRKPRVVGPPITGNKRPRKYVFLPGRSIGKGHTCRANEVLGR
RNRCIHRKRLAGQRQNQTIENEQSQ*
BS23770.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31418-PA | 225 | CG31418-PA | 1..225 | 1..225 | 1189 | 100 | Plus |
| CG31419-PB | 238 | CG31419-PB | 30..217 | 22..212 | 508 | 55 | Plus |
