Clone BS23772 Report

Search the DGRC for BS23772

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:237
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG31867-RA
Protein status:BS23772.pep: gold
Sequenced Size:659

Clone Sequence Records

BS23772.complete Sequence

659 bp assembled on 2011-01-27

GenBank Submission: KX805849

> BS23772.complete
GAAGTTATCAGTCGACATGCGTGATTATGCGTCCAACGTGATACGTTCGC
ATCGCTGCCTTTGCATTTTTACGGTGCTCCAATTGACCCTAATGCTCTCG
ATGCTGGAAGTTCAAATCCAAATTGACCAATCGCCGGAGCTCCAGCGACC
TATGACCCGAGTGCTTTTGGGGGCCCAACTAGGGGAGCTTGCCTGGAGTC
CATTGTTTTCCGGTTTTGCCATGGGTGCCATGTTCTACGGCTATGGTTTG
ATACACCTGCCCAGCAAAGGACCCCTCGGGTGCTTCTTCTCCAGGCTGCG
AACAGCTGGCTTGTCCGTGTGGCAACAATGTAGTCCCGTGATGCTTGTGC
CCTGGACCTTGAAGGTGGCCCAGGGCCTAAGCCTATTCCCTTGCCATTTG
TGGGAGTTTCTTGCGAATGAGGTGTGCTTAGAGACCGACAATTGTCTGCA
GCACGTCATTCTGGCTTTTGTACTGTGGATATACCTGCTAATCCTGGCCA
TCACTAGCTTGGTCTCTGTTGTGAGACTCAATCTTCAGATGCTGGCTGAC
AGGCACATTCACAGCAGAGACCACGAGCTGCGGGCCTATGTACGGGGAAT
CAATGAACTTCTCGGATTTGAGATGATAATGGTCACCGAATGAAAGCTTT
CTAGACCAT

BS23772.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG31867-RB 627 CG31867-PB 1..627 17..643 3135 100 Plus
CG31867-RA 627 CG31867-PA 1..627 17..643 3135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31867-RB 701 CG31867-RB 63..696 17..650 3140 99.7 Plus
CG31867-RA 839 CG31867-RA 63..696 17..650 3140 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11144722..11145355 650..17 3140 99.7 Minus
Blast to na_te.dros performed on 2014-11-26 16:57:39 has no hits.

BS23772.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:40 Download gff for BS23772.complete
Subject Subject Range Query Range Percent Splice Strand
CG31867-RA 63..688 17..642 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:08 Download gff for BS23772.complete
Subject Subject Range Query Range Percent Splice Strand
CG31867-RA 63..688 17..642 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:38 Download gff for BS23772.complete
Subject Subject Range Query Range Percent Splice Strand
CG31867-RA 63..688 17..642 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:38 Download gff for BS23772.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11144730..11145355 17..642 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:08 Download gff for BS23772.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11144730..11145355 17..642 100   Minus

BS23772.pep Sequence

Translation from 16 to 642

> BS23772.pep
MRDYASNVIRSHRCLCIFTVLQLTLMLSMLEVQIQIDQSPELQRPMTRVL
LGAQLGELAWSPLFSGFAMGAMFYGYGLIHLPSKGPLGCFFSRLRTAGLS
VWQQCSPVMLVPWTLKVAQGLSLFPCHLWEFLANEVCLETDNCLQHVILA
FVLWIYLLILAITSLVSVVRLNLQMLADRHIHSRDHELRAYVRGINELLG
FEMIMVTE*

BS23772.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31867-PB 208 CG31867-PB 1..208 1..208 1086 100 Plus
CG31867-PA 208 CG31867-PA 1..208 1..208 1086 100 Plus