BS23782.complete Sequence
833 bp assembled on 2011-02-04
GenBank Submission: KX800380
> BS23782.complete
GAAGTTATCAGTCGACATGCGCATGCTTTTTATGATTTTCACAATAGCCG
AGCGAAGTTTCAAGATTCTAGAACTACCCACCACACCAACGCTTCTGCTG
CGCCGCCAGTCCCACAACTACGGCTACGACTACATCAGCCCCACGCACAT
CGAACTCAGCCGGGAAGCAACTCGCCTGGTAATTCGCCGTCTGCAGCGCA
CCGTTCTCCGCCTGATCCGTGACCCGGACTTCATCATGTCTGCCGAGGCG
AATCCCGAGATGGATAAGGAGCACCACGAGTCCCCATTCGCAGCGAACCG
CAAGGCCGGTGCCAGCGGCGCCGGCAAACAGGACTCGAACTGCCGCACCT
GCAACGATTTCAAGTCGTGGTCCAAGCAGCAACGCCTCATCTCCAACGTG
CAGAGCGCCAAGGTGAAGCACATGGCCGCCGCCGAAAAGCTGACCGTCAA
CGCCGCCGAAGATCCGCTGCCCCGCGACGACTGCCCGCTGGACAAGGTGA
GGCTGGGAATTTCCACCTGGGGACTGCTCCACACCATGGCCGCCTTTTAC
TCGGACAACCCCACGGACACCGAGAAGCGCGACATGAAGACCTTTTTTGA
GGTTCTGTCGCGCCTTTACCCCTGCGAGTTTTGCGCCAAGGACTTTCGCA
CCGACCTGGACGTCAACCCCATCAATGTGAACTCCCAAAAGGAGCTAGCA
CTGTGGCTGTGCAAGTTCCACAACCGAGTGAACGACAAACTGGGCAAACC
GCTCTTCGATTGCACCAAGGTGAACGAGAGGTGGCGCGACGGCTGGCTAG
ACGGCTCCTGCGACTAGAAGCTTTCTAGACCAT
BS23782.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:12:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-RB | 801 | CG12534-PB | 1..801 | 17..817 | 4005 | 100 | Plus |
Alr-RA | 786 | CG12534-PA | 1..786 | 32..817 | 3930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-RB | 1362 | CG12534-RB | 245..1046 | 16..817 | 4010 | 100 | Plus |
Alr-RA | 1107 | CG12534-RA | 1..791 | 27..817 | 3955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19748912..19749312 | 16..416 | 2005 | 100 | Plus |
X | 23542271 | X | 19749386..19749629 | 411..654 | 1220 | 100 | Plus |
X | 23542271 | X | 19749689..19749851 | 655..817 | 815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:12:06 has no hits.
BS23782.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:43 Download gff for
BS23782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RA | 1..795 | 23..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:52 Download gff for
BS23782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 176..976 | 17..817 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:20:39 Download gff for
BS23782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Alr-RB | 246..1046 | 17..817 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:20:39 Download gff for
BS23782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19748913..19749308 | 17..412 | 100 | -> | Plus |
X | 19749388..19749629 | 413..654 | 100 | -> | Plus |
X | 19749689..19749851 | 655..817 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:52 Download gff for
BS23782.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19643421..19643662 | 413..654 | 100 | -> | Plus |
arm_X | 19643722..19643884 | 655..817 | 100 | | Plus |
arm_X | 19642946..19643341 | 17..412 | 100 | -> | Plus |
BS23782.pep Sequence
Translation from 16 to 816
> BS23782.pep
MRMLFMIFTIAERSFKILELPTTPTLLLRRQSHNYGYDYISPTHIELSRE
ATRLVIRRLQRTVLRLIRDPDFIMSAEANPEMDKEHHESPFAANRKAGAS
GAGKQDSNCRTCNDFKSWSKQQRLISNVQSAKVKHMAAAEKLTVNAAEDP
LPRDDCPLDKVRLGISTWGLLHTMAAFYSDNPTDTEKRDMKTFFEVLSRL
YPCEFCAKDFRTDLDVNPINVNSQKELALWLCKFHNRVNDKLGKPLFDCT
KVNERWRDGWLDGSCD*
BS23782.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Alr-PB | 266 | CG12534-PB | 1..266 | 1..266 | 1421 | 100 | Plus |
Alr-PA | 261 | CG12534-PA | 1..261 | 6..266 | 1396 | 100 | Plus |