Clone BS23813 Report

Search the DGRC for BS23813

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:238
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG4095-RA
Protein status:BS23813.pep: full length peptide match
Sequenced Size:1544

Clone Sequence Records

BS23813.complete Sequence

1544 bp assembled on 2011-02-15

GenBank Submission: KX803659

> BS23813.complete
GAAGTTATCAGTCGACATGCTGAAGCAAAACAATGGTCTGCATCTGGCTA
GGCGCAATCTCTGGGTGGTTTGCAGTGGCCTCCGTGCCAAGGATTGCGAC
AGTGGCGGTAAGGGCGGCAAGGGCAAGGAGAATGGCAAGTTTCGTACGGA
GAAGGACACCTTCGGGGAGCTAAAGGTGCCGGCGGACAAGCTGTACGGCG
CACAGACGATGCGCTCCAAATTGAATTTTCCCATTGGCGACATAGGCGAA
CGTATGCCGATGCCGGTGATCCAGGCCATGGGCATACTGAAGAAGGCATG
TGCCGAGGTCAACAAGGATTACGGACTAGATGGCAAGGTGTCGGATGCCG
TATCCTGCGCCTGCGACGATGTCATTTCCGGCAAGCTATACAAACAGGGT
CACTTCCCATTGGTCATCTGGCAAACCGGTTCGGGCACCCAGACCAATAT
GAACACCAACGAGGTGATCAGCAATGCGGCCATTAAGATGATGGGCGGCG
AACTGGGCAGCAAGAAGCCGGTGCATCCCAACGATCATGTGAACAAGTCG
CAGAGCTCCAACGACACCTTCCCCACGGCCATTCACATTTCGGTGGGCAT
GGAGCTGAACGAGCGGCTTGTTCCGGCGGTTACACACTTGAGGGATGCCC
TCAAGTCCAAGTCGGATGAGTTCAAGGACATCATCAAGATCGGACGCACC
CACTTGATGGACGCAGTTCCGCTGACTTTGGGCCAGGAATTCAGCGGTTA
TACACAGCAGTTGACCAACGGTCTGGAAAGGATCAAGGGCTGTCTGCCGC
GCGTCTATGAGCTGGCTCTGGGCGGCACTGCTGTGGGTACGGGTCTGAAC
ACACGCAAGGGATTCGCCGAGAAGGTGGCCAAGCGCATTTCGGAGCTAAC
CTGCTTGCCCTTCGTGTCGGCGCCCAACAAGTTCGAGGCACTGGCTGCCC
GCGATGCCATGGTGGAGGTGCATGGTGTGCTCAACACGATCGCCGTCAGC
CTGATGAAGATCGCCAACGATATCCGATTGCTGGGATCGGGTCCGCGTTG
CGGTCTGGGCGAACTAATGCTGCCGGAGAACGAGCCCGGTAGCTCCATCA
TGCCCGGCAAGGTGAATCCCACGCAATGCGAATCAATGACCATGCTGTGT
GCCCAGGTGATGGGCAATCAGGTGGCGGTGACCATCGGCGGCTCCAACGG
GCACTTCGAGCTAAATGTATTCAAACCCCTGGTCGTGTCCAATGTGCTGC
GCTCCATTCGCTTGTTGGCTGATGGCAGCATGACCTTCAGCAAGAACTGC
GTGGAGGGACTGCAGGCCAACAAGGAGAGGATCGACAAGATCATGAACGA
GTCCTTGATGCTGGTGACCGCGCTGAATCCGCACATTGGCTATGACAAGG
CCGCCCTGATCGCCAAGACGGCACACAAGAATAAGACGACCTTGAAGGAG
GAGGCACTGAAGACCGGAATTACCGAAGAGCAGTTCAAGGAGTGGGTCAA
TCCCAAGGAGATGCTGGGACCGAAGTGAAAGCTTTCTAGACCAT

BS23813.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG4095-RA 1512 CG4095-PA 1..1512 17..1528 7545 99.9 Plus
l(1)G0255-RB 1404 CG4094-PB 14..1328 138..1455 2775 80.9 Plus
l(1)G0255-RA 1488 CG4094-PA 98..1412 138..1455 2775 80.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG4095-RA 1647 CG4095-RA 70..1581 17..1528 7545 99.9 Plus
l(1)G0255-RB 1668 CG4094-RB 132..1446 138..1455 2775 80.9 Plus
l(1)G0255-RA 1740 CG4094-RA 204..1518 138..1455 2775 80.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6682497..6683314 455..1272 4045 99.6 Plus
X 23542271 X 6680566..6681364 462..1260 2180 84.9 Plus
3L 28110227 3L 11464094..11464987 1257..364 1455 77.5 Minus
X 23542271 X 6683370..6683630 1268..1528 1290 99.6 Plus
X 23542271 X 6682218..6682424 259..465 1035 100 Plus
X 23542271 X 6681970..6682134 95..259 825 100 Plus
2L 23513712 2L 10190249..10190497 1195..947 510 80.3 Minus
X 23542271 X 6681836..6681913 17..94 390 100 Plus
3L 28110227 3L 11463778..11464028 1518..1268 385 76.9 Minus
X 23542271 X 6681436..6681623 1268..1455 325 78.2 Plus
X 23542271 X 6680304..6680488 266..453 230 76.1 Plus
Blast to na_te.dros performed on 2014-11-27 01:54:11 has no hits.

BS23813.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:36 Download gff for BS23813.complete
Subject Subject Range Query Range Percent Splice Strand
CG4095-RA 82..1592 17..1527 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:33 Download gff for BS23813.complete
Subject Subject Range Query Range Percent Splice Strand
CG4095-RA 70..1580 17..1527 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:59 Download gff for BS23813.complete
Subject Subject Range Query Range Percent Splice Strand
CG4095-RA 70..1580 17..1527 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:59 Download gff for BS23813.complete
Subject Subject Range Query Range Percent Splice Strand
X 6682506..6683310 464..1268 100 -> Plus
X 6681836..6681913 17..94 100 -> Plus
X 6681970..6682134 95..259 100 -> Plus
X 6682219..6682422 260..463 100 -> Plus
X 6683371..6683629 1269..1527 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:33 Download gff for BS23813.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6575869..6575946 17..94 100 -> Plus
arm_X 6576003..6576167 95..259 100 -> Plus
arm_X 6576252..6576455 260..463 100 -> Plus
arm_X 6576539..6577343 464..1268 100 -> Plus
arm_X 6577404..6577662 1269..1527 99   Plus

BS23813.pep Sequence

Translation from 16 to 1527

> BS23813.pep
MLKQNNGLHLARRNLWVVCSGLRAKDCDSGGKGGKGKENGKFRTEKDTFG
ELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACAEVNK
DYGLDGKVSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEV
ISNAAIKMMGGELGSKKPVHPNDHVNKSQSSNDTFPTAIHISVGMELNER
LVPAVTHLRDALKSKSDEFKDIIKIGRTHLMDAVPLTLGQEFSGYTQQLT
NGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRISELTCLPFV
SAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGEL
MLPENEPGSSIMPGKVNPTQCESMTMLCAQVMGNQVAVTIGGSNGHFELN
VFKPLVVSNVLRSIRLLADGSMTFSKNCVEGLQANKERIDKIMNESLMLV
TALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGITEEQFKEWVNPKEML
GPK*

BS23813.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG4095-PA 503 CG4095-PA 1..503 1..503 2605 100 Plus
l(1)G0255-PB 467 CG4094-PB 5..467 41..503 1958 82.1 Plus
l(1)G0255-PA 495 CG4094-PA 33..495 41..503 1958 82.1 Plus
CG6140-PB 470 CG6140-PB 10..469 43..502 1793 73.9 Plus
CG6140-PA 470 CG6140-PA 10..469 43..502 1793 73.9 Plus