BS23813.complete Sequence
1544 bp assembled on 2011-02-15
GenBank Submission: KX803659
> BS23813.complete
GAAGTTATCAGTCGACATGCTGAAGCAAAACAATGGTCTGCATCTGGCTA
GGCGCAATCTCTGGGTGGTTTGCAGTGGCCTCCGTGCCAAGGATTGCGAC
AGTGGCGGTAAGGGCGGCAAGGGCAAGGAGAATGGCAAGTTTCGTACGGA
GAAGGACACCTTCGGGGAGCTAAAGGTGCCGGCGGACAAGCTGTACGGCG
CACAGACGATGCGCTCCAAATTGAATTTTCCCATTGGCGACATAGGCGAA
CGTATGCCGATGCCGGTGATCCAGGCCATGGGCATACTGAAGAAGGCATG
TGCCGAGGTCAACAAGGATTACGGACTAGATGGCAAGGTGTCGGATGCCG
TATCCTGCGCCTGCGACGATGTCATTTCCGGCAAGCTATACAAACAGGGT
CACTTCCCATTGGTCATCTGGCAAACCGGTTCGGGCACCCAGACCAATAT
GAACACCAACGAGGTGATCAGCAATGCGGCCATTAAGATGATGGGCGGCG
AACTGGGCAGCAAGAAGCCGGTGCATCCCAACGATCATGTGAACAAGTCG
CAGAGCTCCAACGACACCTTCCCCACGGCCATTCACATTTCGGTGGGCAT
GGAGCTGAACGAGCGGCTTGTTCCGGCGGTTACACACTTGAGGGATGCCC
TCAAGTCCAAGTCGGATGAGTTCAAGGACATCATCAAGATCGGACGCACC
CACTTGATGGACGCAGTTCCGCTGACTTTGGGCCAGGAATTCAGCGGTTA
TACACAGCAGTTGACCAACGGTCTGGAAAGGATCAAGGGCTGTCTGCCGC
GCGTCTATGAGCTGGCTCTGGGCGGCACTGCTGTGGGTACGGGTCTGAAC
ACACGCAAGGGATTCGCCGAGAAGGTGGCCAAGCGCATTTCGGAGCTAAC
CTGCTTGCCCTTCGTGTCGGCGCCCAACAAGTTCGAGGCACTGGCTGCCC
GCGATGCCATGGTGGAGGTGCATGGTGTGCTCAACACGATCGCCGTCAGC
CTGATGAAGATCGCCAACGATATCCGATTGCTGGGATCGGGTCCGCGTTG
CGGTCTGGGCGAACTAATGCTGCCGGAGAACGAGCCCGGTAGCTCCATCA
TGCCCGGCAAGGTGAATCCCACGCAATGCGAATCAATGACCATGCTGTGT
GCCCAGGTGATGGGCAATCAGGTGGCGGTGACCATCGGCGGCTCCAACGG
GCACTTCGAGCTAAATGTATTCAAACCCCTGGTCGTGTCCAATGTGCTGC
GCTCCATTCGCTTGTTGGCTGATGGCAGCATGACCTTCAGCAAGAACTGC
GTGGAGGGACTGCAGGCCAACAAGGAGAGGATCGACAAGATCATGAACGA
GTCCTTGATGCTGGTGACCGCGCTGAATCCGCACATTGGCTATGACAAGG
CCGCCCTGATCGCCAAGACGGCACACAAGAATAAGACGACCTTGAAGGAG
GAGGCACTGAAGACCGGAATTACCGAAGAGCAGTTCAAGGAGTGGGTCAA
TCCCAAGGAGATGCTGGGACCGAAGTGAAAGCTTTCTAGACCAT
BS23813.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:54:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4095-RA | 1512 | CG4095-PA | 1..1512 | 17..1528 | 7545 | 99.9 | Plus |
l(1)G0255-RB | 1404 | CG4094-PB | 14..1328 | 138..1455 | 2775 | 80.9 | Plus |
l(1)G0255-RA | 1488 | CG4094-PA | 98..1412 | 138..1455 | 2775 | 80.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:54:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4095-RA | 1647 | CG4095-RA | 70..1581 | 17..1528 | 7545 | 99.9 | Plus |
l(1)G0255-RB | 1668 | CG4094-RB | 132..1446 | 138..1455 | 2775 | 80.9 | Plus |
l(1)G0255-RA | 1740 | CG4094-RA | 204..1518 | 138..1455 | 2775 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:54:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6682497..6683314 | 455..1272 | 4045 | 99.6 | Plus |
X | 23542271 | X | 6680566..6681364 | 462..1260 | 2180 | 84.9 | Plus |
3L | 28110227 | 3L | 11464094..11464987 | 1257..364 | 1455 | 77.5 | Minus |
X | 23542271 | X | 6683370..6683630 | 1268..1528 | 1290 | 99.6 | Plus |
X | 23542271 | X | 6682218..6682424 | 259..465 | 1035 | 100 | Plus |
X | 23542271 | X | 6681970..6682134 | 95..259 | 825 | 100 | Plus |
2L | 23513712 | 2L | 10190249..10190497 | 1195..947 | 510 | 80.3 | Minus |
X | 23542271 | X | 6681836..6681913 | 17..94 | 390 | 100 | Plus |
3L | 28110227 | 3L | 11463778..11464028 | 1518..1268 | 385 | 76.9 | Minus |
X | 23542271 | X | 6681436..6681623 | 1268..1455 | 325 | 78.2 | Plus |
X | 23542271 | X | 6680304..6680488 | 266..453 | 230 | 76.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:54:11 has no hits.
BS23813.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:36 Download gff for
BS23813.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4095-RA | 82..1592 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:33 Download gff for
BS23813.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4095-RA | 70..1580 | 17..1527 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:33:59 Download gff for
BS23813.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4095-RA | 70..1580 | 17..1527 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:33:59 Download gff for
BS23813.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6682506..6683310 | 464..1268 | 100 | -> | Plus |
X | 6681836..6681913 | 17..94 | 100 | -> | Plus |
X | 6681970..6682134 | 95..259 | 100 | -> | Plus |
X | 6682219..6682422 | 260..463 | 100 | -> | Plus |
X | 6683371..6683629 | 1269..1527 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:33 Download gff for
BS23813.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6575869..6575946 | 17..94 | 100 | -> | Plus |
arm_X | 6576003..6576167 | 95..259 | 100 | -> | Plus |
arm_X | 6576252..6576455 | 260..463 | 100 | -> | Plus |
arm_X | 6576539..6577343 | 464..1268 | 100 | -> | Plus |
arm_X | 6577404..6577662 | 1269..1527 | 99 | | Plus |
BS23813.pep Sequence
Translation from 16 to 1527
> BS23813.pep
MLKQNNGLHLARRNLWVVCSGLRAKDCDSGGKGGKGKENGKFRTEKDTFG
ELKVPADKLYGAQTMRSKLNFPIGDIGERMPMPVIQAMGILKKACAEVNK
DYGLDGKVSDAVSCACDDVISGKLYKQGHFPLVIWQTGSGTQTNMNTNEV
ISNAAIKMMGGELGSKKPVHPNDHVNKSQSSNDTFPTAIHISVGMELNER
LVPAVTHLRDALKSKSDEFKDIIKIGRTHLMDAVPLTLGQEFSGYTQQLT
NGLERIKGCLPRVYELALGGTAVGTGLNTRKGFAEKVAKRISELTCLPFV
SAPNKFEALAARDAMVEVHGVLNTIAVSLMKIANDIRLLGSGPRCGLGEL
MLPENEPGSSIMPGKVNPTQCESMTMLCAQVMGNQVAVTIGGSNGHFELN
VFKPLVVSNVLRSIRLLADGSMTFSKNCVEGLQANKERIDKIMNESLMLV
TALNPHIGYDKAALIAKTAHKNKTTLKEEALKTGITEEQFKEWVNPKEML
GPK*
BS23813.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4095-PA | 503 | CG4095-PA | 1..503 | 1..503 | 2605 | 100 | Plus |
l(1)G0255-PB | 467 | CG4094-PB | 5..467 | 41..503 | 1958 | 82.1 | Plus |
l(1)G0255-PA | 495 | CG4094-PA | 33..495 | 41..503 | 1958 | 82.1 | Plus |
CG6140-PB | 470 | CG6140-PB | 10..469 | 43..502 | 1793 | 73.9 | Plus |
CG6140-PA | 470 | CG6140-PA | 10..469 | 43..502 | 1793 | 73.9 | Plus |