BS23839.complete Sequence
1169 bp assembled on 2011-01-27
GenBank Submission: KX802698
> BS23839.complete
GAAGTTATCAGTCGACATGACGCAATGGTGTGCTATCAGTGTAATGAAGG
CCGTGCTCTGCGTCGGCTGCACGGAGGTGGACTACGTGACCACCATGGAT
AAGGTCGACTTCCAGTGCGACAGGTGCAGCACCCAGAATGGAATGCTTCA
GCGCAGCGGAAGATCCTCGAATGTTAGTACGGCCCTGCGTCTGTTGGGCG
CCAATGTGGAGTTGTTCGGTGTGCTCACCCGTAATCCCACCTATCGCATG
ATTCTGGATGATCTCGAGCAGCGGGGCATTGATATTAGCCATTGTACATT
CACGGACGCAAGTCCTCCCTTTTCCACAATTGTCCAAGATCGCTGGACGC
GTCGTTGCACGGTGGTGTATTGCGACAAGTCATTTCCATATGTTACGGCA
GCGGATTTCCGCAAATTGGATCTCGATCAATACGGCTGGGTGAATTTTGA
GGCACGGAGTCCACGTGAAACTTGCGATATGATACGCCTAATCCTCGATC
ACAACAACGGGCGGGATGAACGGGATCGGATAGTGGTATCGTTGCAGATT
TTCAATTCCTTCGAACAGGTCGTGCATCTGATTGCCATGTGCGACTATGT
GTTCGTCACCAAGTATATAGCCGAGTCCAGAGGCTGGAAGTCACCGCTGG
AAGCCTGCGAGGGTGTCAATGCGCTACTGCGCATGCCAAGGAACATTAGA
ATTCGCAGACCCTGCATCATTGTGCCGTGGAGCAGCCTGGGAGCAGGATG
TATGACCACGGAAGGGGAGTACTTCGAAGTGCCAGCACACAAGCCGAAAA
AGATCATCGATCGGGTGGGCGATAGTGATTGCTTCACGGCGGGCTTCATT
TATGCCGCTTTTGTGCGGCAAAGGCGATTGGCCGAAGCCGTGGACTTCGC
CAATGCTGTGGCCAGCTATAAGTTGGGCTATGTGGGTTTCGATTGCCTGG
GTCATTTGCCAATCGATGCGGTTAAGCTGCCCGTTAGAATGAGGTGTGGC
AGTGAGGTGTCCTCCGACGATGAGGATAACGGCGATCAGTTGAATAGCTG
CAAGAAGCACCTGTTACGCCCGATTGAGTTCCTGCCGGAAAAGTCCTCCA
TTGCACCCACTGAGAAGGAAGTTCCGATCGAGACTTCGCAACTTTCTAGC
TAGAAGCTTTCTAGACCAT
BS23839.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12289-RA | 1137 | CG12289-PA | 1..1137 | 17..1153 | 5685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12289-RA | 1395 | CG12289-RA | 179..1317 | 17..1155 | 5695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11457154..11458292 | 1155..17 | 5695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:55 has no hits.
BS23839.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:07 Download gff for
BS23839.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12289-RA | 179..1315 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:38 Download gff for
BS23839.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12289-RA | 179..1315 | 17..1153 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:42 Download gff for
BS23839.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12289-RA | 179..1315 | 17..1153 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:42 Download gff for
BS23839.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11457156..11458292 | 17..1153 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:38 Download gff for
BS23839.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11450256..11451392 | 17..1153 | 100 | | Minus |
BS23839.pep Sequence
Translation from 16 to 1152
> BS23839.pep
MTQWCAISVMKAVLCVGCTEVDYVTTMDKVDFQCDRCSTQNGMLQRSGRS
SNVSTALRLLGANVELFGVLTRNPTYRMILDDLEQRGIDISHCTFTDASP
PFSTIVQDRWTRRCTVVYCDKSFPYVTAADFRKLDLDQYGWVNFEARSPR
ETCDMIRLILDHNNGRDERDRIVVSLQIFNSFEQVVHLIAMCDYVFVTKY
IAESRGWKSPLEACEGVNALLRMPRNIRIRRPCIIVPWSSLGAGCMTTEG
EYFEVPAHKPKKIIDRVGDSDCFTAGFIYAAFVRQRRLAEAVDFANAVAS
YKLGYVGFDCLGHLPIDAVKLPVRMRCGSEVSSDDEDNGDQLNSCKKHLL
RPIEFLPEKSSIAPTEKEVPIETSQLSS*
BS23839.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12289-PA | 378 | CG12289-PA | 1..378 | 1..378 | 2005 | 100 | Plus |
CG7328-PA | 306 | CG7328-PA | 4..304 | 10..316 | 633 | 42 | Plus |
CG7551-PB | 322 | CG7551-PB | 15..316 | 11..314 | 572 | 36.2 | Plus |
CG7335-PA | 372 | CG7335-PA | 33..367 | 13..319 | 321 | 27.1 | Plus |