BS23874.complete Sequence
377 bp assembled on 2011-01-27
GenBank Submission: KX805505
> BS23874.complete
GAAGTTATCAGTCGACATGCCACGCAAACAGAGAAGTGCTTCGGTCAAAG
CAGGCTCTACAAACTATATGCCTGCGGTGGTGCCCACCGTCACGAATTCC
GAAATGGTCTTCAAGGAAGCGGCTGCCCACGCAGTGGGCGTGGCAGCAGG
ATCAGTCGTGGGTCATGCCATCGGATCAGGAATAACGGGGCTATTCAGGC
GGCGTGACCAGCAGCCGCACCACAGCGATTTAGTCGAAGAAGGTCCTTGC
GCCAAGGAAATGAAGGAGTTCTTGAAGTGCACCGAGGACAATGACGATCT
CAGTGTGTGCAAGGAGTTCAACGATGCTGTGCGACGATGCCACCGCCAGT
ACAATATTTAGAAGCTTTCTAGACCAT
BS23874.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31008-RA | 345 | CG31008-PA | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31008-RA | 529 | CG31008-RA | 91..435 | 17..361 | 1725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30989572..30989916 | 361..17 | 1725 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:01:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 5260..5347 | 376..289 | 134 | 61.4 | Minus |
BS23874.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:28 Download gff for
BS23874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31008-RA | 91..435 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:32 Download gff for
BS23874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31008-RA | 91..435 | 17..361 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:33 Download gff for
BS23874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31008-RA | 91..435 | 17..361 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:33 Download gff for
BS23874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30989572..30989916 | 17..361 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:32 Download gff for
BS23874.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26815294..26815638 | 17..361 | 100 | | Minus |
BS23874.pep Sequence
Translation from 16 to 360
> BS23874.pep
MPRKQRSASVKAGSTNYMPAVVPTVTNSEMVFKEAAAHAVGVAAGSVVGH
AIGSGITGLFRRRDQQPHHSDLVEEGPCAKEMKEFLKCTEDNDDLSVCKE
FNDAVRRCHRQYNI*
BS23874.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31008-PA | 114 | CG31008-PA | 1..114 | 1..114 | 599 | 100 | Plus |
CG31007-PA | 176 | CG31007-PA | 73..176 | 32..114 | 255 | 51 | Plus |
CG5010-PA | 170 | CG5010-PA | 37..169 | 2..114 | 174 | 30.8 | Plus |
CG5010-PB | 122 | CG5010-PB | 18..121 | 31..114 | 168 | 32.7 | Plus |