BS23879.complete Sequence
794 bp assembled on 2011-01-27
GenBank Submission: KX804008
> BS23879.complete
GAAGTTATCAGTCGACATGGGAGATCGCAACAAGCAGCCGGTTATTCTGC
TGAAGGTTCCGTCCTCCGATGATTTCTATGGTTCGGCGTTGCGCAGCCAT
AACCTGGATCCCATCTTCATTACTCCCTCGCATTTTGTGTTCAAGAATCT
GAAGCAATTGCAAGCCAAGTTGCATGAGCCGCACAAATATGCCGGGATTA
TATTTGCATCCCCGCGCTGTGTCCAAGCTGTAAACGAGGCACTAGGAAAG
ACACCACTTCCTAGTTGCTGGCGTGCGTTACACAATTATTCCCTAGGCAA
GAACACGCACAGCGCCGCCTGGATAACATTCCAGAATCTTCCGACTCTGG
GCGATCATGCCGTGAATGCAAACAATCTGTGCGATCTGATCGTGGAGACG
TTTGGACCCAAGAGGGATCTGCCACTGCTCATGCCCTGCGGCAATGGCGT
GGGTCAGACACTGCGCCTCCGTTTGGTCGCCCAGGGATTCCGGGTGGATG
CCTGCGAAGTGTACGAGAGTCGGTCGCATCCGGATTTCGTCAATCAGATG
CGGCACGCCCTCAAATTCAAGCGAATGGAAACGATTGTGTTCTTCGGACC
CTCCAGTGTCCGCAGCTCCTTGGAGTTCTTTGGGAACTACAACGTTTCGC
TTAAGGATCGCAAGCTGATAGCCGTGGGCAGTGGCACCAGGAAGGCAATG
GAGGAATCTGGAATTAAGGCGGACGGAGTCGTGAATGCTGCTGACGTCGA
CCGCCTGATAAATATCATCAAAACATAGAAGCTTTCTAGACCAT
BS23879.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-RA | 762 | CG9589-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-RA | 974 | CG9589-RA | 83..845 | 16..778 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15788603..15789365 | 16..778 | 3815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:33 has no hits.
BS23879.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:27 Download gff for
BS23879.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..845 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:28 Download gff for
BS23879.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..845 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:30 Download gff for
BS23879.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9589-RA | 84..845 | 17..778 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:30 Download gff for
BS23879.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15788604..15789365 | 17..778 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:28 Download gff for
BS23879.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11614326..11615087 | 17..778 | 100 | | Plus |
BS23879.pep Sequence
Translation from 16 to 777
> BS23879.pep
MGDRNKQPVILLKVPSSDDFYGSALRSHNLDPIFITPSHFVFKNLKQLQA
KLHEPHKYAGIIFASPRCVQAVNEALGKTPLPSCWRALHNYSLGKNTHSA
AWITFQNLPTLGDHAVNANNLCDLIVETFGPKRDLPLLMPCGNGVGQTLR
LRLVAQGFRVDACEVYESRSHPDFVNQMRHALKFKRMETIVFFGPSSVRS
SLEFFGNYNVSLKDRKLIAVGSGTRKAMEESGIKADGVVNAADVDRLINI
IKT*
BS23879.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9589-PA | 253 | CG9589-PA | 1..253 | 1..253 | 1327 | 100 | Plus |
CG1885-PB | 277 | CG1885-PB | 1..253 | 1..251 | 513 | 41.9 | Plus |
CG1885-PA | 277 | CG1885-PA | 1..253 | 1..251 | 513 | 41.9 | Plus |