BS23886.complete Sequence
215 bp assembled on 2011-01-27
GenBank Submission: KX804430
> BS23886.complete
GAAGTTATCAGTCGACATGACACGCGGCAACCAACGAGACCTGGCCCGCC
AGAAGAACCAGAAGAAGCAGGCGGATTTGACCAAGGGAAAGCGAACCGAT
AACCTCACCGTGGAGCAAAGGAAGGCCAGGGACGCTGAGTTAATGCGGGA
GAAGCAGAAAAAAAAGGAAGAGGCCGCTGCGGCGGGCACAAGCAAATAGA
AGCTTTCTAGACCAT
BS23886.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17931-RD | 183 | CG17931-PD | 1..183 | 17..199 | 915 | 100 | Plus |
| CG17931-RC | 183 | CG17931-PC | 1..183 | 17..199 | 915 | 100 | Plus |
| CG17931-RA | 183 | CG17931-PA | 1..183 | 17..199 | 915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17931-RD | 1367 | CG17931-RD | 178..360 | 17..199 | 915 | 100 | Plus |
| CG17931-RC | 1081 | CG17931-RC | 178..360 | 17..199 | 915 | 100 | Plus |
| CG17931-RA | 762 | CG17931-RA | 178..360 | 17..199 | 915 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16358682..16358788 | 130..24 | 535 | 100 | Minus |
| 3R | 32079331 | 3R | 16358542..16358614 | 199..127 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:01:18 has no hits.
BS23886.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:27 Download gff for
BS23886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17931-RA | 176..352 | 17..193 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:21 Download gff for
BS23886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17931-RA | 178..354 | 17..193 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:24 Download gff for
BS23886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17931-RA | 178..354 | 17..193 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:24 Download gff for
BS23886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16358548..16358611 | 130..193 | 100 | <- | Minus |
| 3R | 16358683..16358792 | 17..129 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:21 Download gff for
BS23886.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12184270..12184333 | 130..193 | 100 | <- | Minus |
| arm_3R | 12184405..12184514 | 17..129 | 96 | | Minus |
BS23886.pep Sequence
Translation from 16 to 198
> BS23886.pep
MTRGNQRDLARQKNQKKQADLTKGKRTDNLTVEQRKARDAELMREKQKKK
EEAAAAGTSK*
BS23886.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17931-PD | 60 | CG17931-PD | 1..60 | 1..60 | 296 | 100 | Plus |
| CG17931-PC | 60 | CG17931-PC | 1..60 | 1..60 | 296 | 100 | Plus |
| CG17931-PA | 60 | CG17931-PA | 1..60 | 1..60 | 296 | 100 | Plus |
