BS23902.complete Sequence
875 bp assembled on 2011-01-28
GenBank Submission: KX800792
> BS23902.complete
GAAGTTATCAGTCGACATGTCTGGAACATCGACCTCTGAACGCTCCAACT
CCGAAGACAGCCCGTTGAATCCCTGCCTAACGGAGGTCCTCAGGAATTGT
GCCAACATTCAGTCGCTGGAGAGCTTGAACTACGAATATAACGACGTTTT
GCTGACCGAAGACAACGTGGGGAAGATGATTACGCCGAATCCGTATTCCT
TTAGTGGCAACATTTCCATCAGCAGTTGTCCAAGTGAAGATGTATCATTT
TCGGAAAGCATCCTAGAGGACAACGGACGCATTTCGCTGGCCTATGAGAA
CCTGAAGACAATTCCGCGGCGACTGGCCGACAAATTCGCAGCGCAGACCA
AGTTTCTCGATTTGAGTCACAATGATTTCCGAAACTTGAGATTTCTCTCC
TTTTTCGAGGATCTGGACACTTTAATCCTGGACCGCAACGTAAACCTGGA
CATAAACACTTTTCCTTATTTGCCGAGCTTAAGGATCTTGTGGATCAACA
ATTGCGATATAGCAAATATAACCGATTGGATACACCGCATCGAACGGCAC
TGTCCTGCGCTGGATCAGCTCTCTTGCATGGGGAATCCTGGCATCCGCAC
AGTTTTCGGGGGCCAAGGACCCCGCGAGTATATACTACAGGTGCTTCCCC
AGCTAAAATATCTCGATGGACTTCCAACCAGCAGGAATGCAGCTTATGCG
ACGCTGTCTTCCTCACAAGGACAGGGTCCGGACTCCACGAGCAATTCGGA
AAAGCCTCCACTCGCATCCGCATTCACTTTCAAGGACATCATCCGTCCAA
AGTATTCCAGAAAATCGCACAGCGGACGGATGTTTGGCAACGGCTCCTCC
ACAAACTGAAAGCTTTCTAGACCAT
BS23902.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-RB | 843 | CG31274-PB | 1..843 | 17..859 | 4215 | 100 | Plus |
MESK4-RB | 843 | CG31447-PB | 1..843 | 17..859 | 4215 | 100 | Plus |
MESK4-RA | 843 | CG31447-PA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-RB | 1399 | CG31274-RB | 122..965 | 17..860 | 4220 | 100 | Plus |
MESK4-RB | 1488 | CG31447-RB | 112..955 | 17..860 | 4220 | 100 | Plus |
MESK4-RA | 1390 | CG31447-RA | 112..955 | 17..860 | 4220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16989020..16989455 | 58..493 | 2180 | 100 | Plus |
3R | 32079331 | 3R | 16993232..16993667 | 58..493 | 2180 | 100 | Plus |
3R | 32079331 | 3R | 16989518..16989886 | 492..860 | 1845 | 100 | Plus |
3R | 32079331 | 3R | 16993730..16994098 | 492..860 | 1845 | 100 | Plus |
3R | 32079331 | 3R | 16988925..16988968 | 17..60 | 220 | 100 | Plus |
3R | 32079331 | 3R | 16993137..16993180 | 17..60 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:02:05 has no hits.
BS23902.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:29 Download gff for
BS23902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MESK4-RA | 96..937 | 17..858 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:42 Download gff for
BS23902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MESK4-RA | 112..953 | 17..858 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:43 Download gff for
BS23902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MESK4-RA | 112..953 | 17..858 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:43 Download gff for
BS23902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16988925..16988968 | 17..60 | 100 | -> | Plus |
3R | 16989023..16989454 | 61..492 | 100 | -> | Plus |
3R | 16989519..16989884 | 493..858 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:42 Download gff for
BS23902.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12814647..12814690 | 17..60 | 100 | -> | Plus |
arm_3R | 12814745..12815176 | 61..492 | 100 | -> | Plus |
arm_3R | 12815241..12815606 | 493..858 | 100 | | Plus |
BS23902.pep Sequence
Translation from 16 to 858
> BS23902.pep
MSGTSTSERSNSEDSPLNPCLTEVLRNCANIQSLESLNYEYNDVLLTEDN
VGKMITPNPYSFSGNISISSCPSEDVSFSESILEDNGRISLAYENLKTIP
RRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFP
YLPSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQ
GPREYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLA
SAFTFKDIIRPKYSRKSHSGRMFGNGSSTN*
BS23902.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-PB | 280 | CG31274-PB | 1..280 | 1..280 | 1466 | 100 | Plus |
MESK4-PB | 280 | CG31447-PB | 1..280 | 1..280 | 1466 | 100 | Plus |
MESK4-PA | 280 | CG31447-PA | 1..280 | 1..280 | 1466 | 100 | Plus |
CG31076-PB | 182 | CG31076-PB | 7..153 | 85..217 | 162 | 32.4 | Plus |