BS23935.complete Sequence
368 bp assembled on 2011-01-28
GenBank Submission: KX806417
> BS23935.complete
GAAGTTATCAGTCGACATGAGTGGTTACCAATATCTGGACGTGAAGATAA
AACTCCGTGATCCAGACTCCGTGACTCTGACGCCCGTATTCTTCTGTGGC
TGCATCCATAGCTCCTTGGCTAGTATTTTTGGCGAAATAGGTGGCCAGAC
CATACTGGAAATTGTGAAATTTAGTTCCAGCCAAAAACGCTCCATTCTCC
GGGTGCCCGAGAACGTCCTGGATCGCGTTCGCGTAGCTATAGCCCTAATA
GGATACTACCAGGAGGTGCCCTGCCATTTTCAGGTGCTCAGCACATCCCG
AAAGCCCTTGGATTTTGAGGAATCCCCCGAGGAGTTTGTAGCATTTAACT
AGAAGCTTTCTAGACCAT
BS23935.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:02:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34317-RA | 336 | CG34317-PA | 1..336 | 17..352 | 1680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:02:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7950-RA | 1168 | CG7950-RA | 144..480 | 16..352 | 1685 | 100 | Plus |
CG34317-RA | 1168 | CG34317-RA | 144..480 | 16..352 | 1685 | 100 | Plus |
CG7950-RB | 1192 | CG7950-RB | 201..504 | 49..352 | 1520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:02:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30057140..30057443 | 49..352 | 1520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:02:44 has no hits.
BS23935.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:30 Download gff for
BS23935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34317-RA | 151..486 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:03 Download gff for
BS23935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34317-RA | 145..480 | 17..352 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:57 Download gff for
BS23935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34317-RA | 145..480 | 17..352 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:57 Download gff for
BS23935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30057003..30057034 | 17..48 | 100 | -> | Plus |
3R | 30057140..30057443 | 49..352 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:03 Download gff for
BS23935.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25882725..25882756 | 17..48 | 100 | -> | Plus |
arm_3R | 25882862..25883165 | 49..352 | 100 | | Plus |
BS23935.pep Sequence
Translation from 16 to 351
> BS23935.pep
MSGYQYLDVKIKLRDPDSVTLTPVFFCGCIHSSLASIFGEIGGQTILEIV
KFSSSQKRSILRVPENVLDRVRVAIALIGYYQEVPCHFQVLSTSRKPLDF
EESPEEFVAFN*
BS23935.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34317-PA | 111 | CG34317-PA | 1..111 | 1..111 | 568 | 100 | Plus |
CG15526-PA | 112 | CG15526-PA | 1..107 | 1..109 | 283 | 51.4 | Plus |