BS23936.complete Sequence
496 bp assembled on 2011-01-28
GenBank Submission: KX805181
> BS23936.complete
GAAGTTATCAGTCGACATGTCCGAGCTAGGTGGAAATGATTTCCTGGAGG
CCACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGCTATCTGCCTGCTA
GCTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAATATTTGGGTTTGG
AATAGCCACCATGGTTATGACCTTTACAGGTTTGCTGGTGCTAGAAGGCA
CACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTGCCTGGGAGGACTA
GTCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTGCTGCCTATTTCGG
ATTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAGATCCATAAGAGCG
CGTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGGCGATCCGCCGCCA
GCTGCTGTGACCATAACCGATGAACCCACTTCTACGACTGCATAAAAGCT
TTCTAGACCCATTCTGTTGGGCCGCGCGAAAAACGGGCGGAGGGGG
BS23936.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:03:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RB | 429 | CG32803-PB | 1..429 | 17..445 | 2145 | 100 | Plus |
| CG32803-RA | 642 | CG32803-PA | 214..642 | 17..445 | 2145 | 100 | Plus |
| CG32803-RC | 729 | CG32803-PC | 301..729 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RB | 790 | CG32803-RB | 289..718 | 17..446 | 2150 | 100 | Plus |
| CG32803-RA | 818 | CG32803-RA | 323..752 | 17..446 | 2150 | 100 | Plus |
| CG32803-RC | 905 | CG32803-RC | 410..839 | 17..446 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1900765..1901015 | 446..196 | 1255 | 100 | Minus |
| X | 23542271 | X | 1901064..1901245 | 198..17 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:03:06 has no hits.
BS23936.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:31 Download gff for
BS23936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RA | 350..779 | 17..446 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:10 Download gff for
BS23936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RC | 410..839 | 17..446 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:05 Download gff for
BS23936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RC | 410..839 | 17..446 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:05 Download gff for
BS23936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1900765..1901013 | 198..446 | 100 | <- | Minus |
| X | 1901065..1901245 | 17..197 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:10 Download gff for
BS23936.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1794798..1795046 | 198..446 | 100 | <- | Minus |
| arm_X | 1795098..1795278 | 17..197 | 100 | | Minus |
BS23936.pep Sequence
Translation from 16 to 444
> BS23936.pep
MSELGGNDFLEATAAWCTRNPHVAICLLAGGLVFMLPFLIIFGFGIATMV
MTFTGLLVLEGTLLTIVSMVFFACLGGLVIMVPLFGVAAVAAYFGFAQVY
GLCDGIEIHKSAWVMFFRDQRKAGDPPPAAVTITDEPTSTTA*
BS23936.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-PB | 142 | CG32803-PB | 1..142 | 1..142 | 738 | 100 | Plus |
| CG32803-PA | 213 | CG32803-PA | 72..213 | 1..142 | 738 | 100 | Plus |
| CG32803-PC | 242 | CG32803-PC | 101..242 | 1..142 | 738 | 100 | Plus |
| CG32803-PD | 207 | CG32803-PD | 72..207 | 1..142 | 694 | 95.8 | Plus |
