BS23941.complete Sequence
449 bp assembled on 2011-01-28
GenBank Submission: KX800400
> BS23941.complete
GAAGTTATCAGTCGACATGGTAGCTGGTGGTGCCTCGGAAACGGGCGGCG
TGAAGCCGATGGTAATTGCGGGCCGCATGGTGCGGGAGCGTGAGCGCCTG
ATCGGCATGTCGCCGGAGGAGCGCGCCTGGCGCAAACAGTGGCTGAAGGA
CCAGGAGCTGCACCATGGACCCCGCAAGGTGCCCGCCCTGGAGCTGGAGC
TGAACAACCCCATCAAGCGCTTCTACCGCGCTCCCCTCGACAAGGTCTGC
AATGTTTTGGAACCCGTCCTGGGCTTTCAGCGCGCGTACACCGTGCGCTT
CTGGACCGGAAAGGCTCTGCTCGCCCTAACCGGAATCTACGCCGGCGCCT
ACTACTTCAAGTACAACCAGAATGTAAGTAATTGGTCGAGGATTCAAGTT
GGCTATTACTATAAGTCATTCCAAATGTACTAAAAGCTTTCTAGACCAT
BS23941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:05:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)35Di-RC | 504 | CG13240-PC | 1..358 | 17..374 | 1790 | 100 | Plus |
l(2)35Di-RA | 504 | CG13240-PA | 1..358 | 17..374 | 1790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)35Di-RC | 992 | CG13240-RC | 103..460 | 17..374 | 1790 | 100 | Plus |
l(2)35Di-RA | 710 | CG13240-RA | 103..460 | 17..374 | 1790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15750721..15750976 | 272..17 | 1280 | 100 | Minus |
2L | 23513712 | 2L | 15750490..15750652 | 433..271 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:05:22 has no hits.
BS23941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:34 Download gff for
BS23941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RB | 79..493 | 17..431 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:02 Download gff for
BS23941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RA | 103..460 | 17..374 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:58 Download gff for
BS23941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)35Di-RA | 103..460 | 17..374 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:58 Download gff for
BS23941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15750492..15750651 | 272..431 | 100 | <- | Minus |
2L | 15750722..15750976 | 17..271 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:02 Download gff for
BS23941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15750492..15750651 | 272..431 | 100 | <- | Minus |
arm_2L | 15750722..15750976 | 17..271 | 100 | | Minus |
BS23941.pep Sequence
Translation from 16 to 432
> BS23941.pep
MVAGGASETGGVKPMVIAGRMVRERERLIGMSPEERAWRKQWLKDQELHH
GPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGFQRAYTVRFWTGKA
LLALTGIYAGAYYFKYNQNVSNWSRIQVGYYYKSFQMY*
BS23941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)35Di-PC | 167 | CG13240-PC | 1..123 | 1..125 | 638 | 96.8 | Plus |
l(2)35Di-PA | 167 | CG13240-PA | 1..123 | 1..125 | 638 | 96.8 | Plus |