BS23947.complete Sequence
1484 bp assembled on 2011-02-18
GenBank Submission: KX801606
> BS23947.complete
GAAGTTATCAGTCGACATGACAACACGCACGGTGCAGAGAAATCTGTGGG
CCTCCGCTGCGGTGGTCCTAGTTCTGCTCCTGCTCTGGACGGACACCACT
GGAGGCTATTTTGCAGCCATCGATGAGACGGAGACTAGCAAAAACTGCTT
CTGCGAGTTGGAGGGATCTATAAACGACTGCAGCTGCGATGTGGACACGG
TGGATCACTTTAACAACATGAAAATCTATCCGCGATTGCAGAGTCTGCTG
GTGAAGAACTTCTTCCGCTTCTACAAGGTGAACCTGCGGCAGGAGTGCCC
CTTCTGGCCGGATGACAGTCGCTGTGCGATGCGCTTCTGCCAGGTGGAGA
ACTGCGAGGAGCAAGCGATTCCCCAGGGCATCAAGGACAAGGGAGAGCAC
AAGGAGAAGGCCGCGTTTAAATACACGCGCGAGGCGCAAGTTGGGGGCTC
AGCGTGCTCGGATGGAGAGGATTTCGACAGCTCTCTGGGTTTCCTGGACA
CGAGCATAAGTGATCAGGCGCATCGGGAATTCGAACTGTGGGCGAAGCAT
GATGAGGCGGAAGAGGACTTTTGCATCGTGGACGATCATGAGGAGGGATC
CCAGTATGTGGATCTGCTCCTAAATCCTGAGCGGTACACCGGCTATAAGG
GCGAATCGGCACATCGCATCTGGAAGAGCATCTATCTGGAGAACTGCTTC
GGTGGCAACAACGAGACGGCTAACAAGTTCTCTAACTACGTGCCTCATTT
GGATTTGCGAAATGTGTGCTTGGAGCAGCGTGCCTTTTATCGCATTATTT
CTGGCCTGCACTCTAGTATCAACATTCATCTGTGCTCCAAATACCTGCTG
TCAGAGTCAAAGGACTTCTTAGATCCGCAGGGCATCTGGGGTCCCAACGT
AAAGGAGTTTAAACGACGCTTTAGTCCAGAAACCACAAGCGGTGAAGGTC
CGCACTGGCTGCGAAACCTCTACTTCATCTATCTGATAGAACTGCGCGCC
TTGGCTAAGGCTGCTCCTTATCTGCGGCGAGAAGATTACTACACGGGCAT
CGCAGAGGAGGATGATGAGGTTAAACTAGCCATCAATGATATGTTGAGTG
TCATAGAAAATTTTCAATCCCACTTCGACGAGAACGCCCTCTTCAGTAAT
GGAATCGCTTCTATTAAGTTCAAGCACGACTATAAGGAAAAGTTCCGAAA
CATATCCCGCATCATGAGCTGCGTAGGCTGCGACAAGTGCAAACTGTGGG
GGAAGCTGCAGACGCAGGGATTGGGTACTGCTTTAAAGATTCTCTACTCA
GAGAAGCTCAATCTGGCCACGGAAAGCGGGTTGTGGGACAAGCCGCACAT
CGAAGCGGATCCCATCTTCAGGCTGTCGCGAACAGAGATTGTAGCTCTAT
TTAATGCGTTTGGCAGACTATCCAACAGTATATACGAGATGGAGAATTTC
CGGTGCGTGCTGAGGTAAAAGCTTTCTAGACCAT
BS23947.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ero1L-RB | 1452 | CG1333-PB | 1..1452 | 17..1468 | 7260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ero1L-RB | 2100 | CG1333-RB | 249..1700 | 17..1468 | 7260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4172225..4172910 | 422..1107 | 3430 | 100 | Plus |
| 3L | 28110227 | 3L | 4172968..4173276 | 1108..1416 | 1545 | 100 | Plus |
| 3L | 28110227 | 3L | 4171212..4171477 | 156..421 | 1330 | 100 | Plus |
| 3L | 28110227 | 3L | 4170652..4170796 | 17..161 | 710 | 99.3 | Plus |
| 3L | 28110227 | 3L | 4173334..4173389 | 1413..1468 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:33:16 has no hits.
BS23947.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:56 Download gff for
BS23947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ero1L-RB | 387..1836 | 17..1466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:14 Download gff for
BS23947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ero1L-RB | 249..1698 | 17..1466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:01 Download gff for
BS23947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ero1L-RB | 249..1698 | 17..1466 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:01 Download gff for
BS23947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4171214..4171477 | 158..421 | 100 | -> | Plus |
| 3L | 4170652..4170792 | 17..157 | 100 | -> | Plus |
| 3L | 4172225..4172910 | 422..1107 | 100 | -> | Plus |
| 3L | 4172968..4173276 | 1108..1416 | 100 | -> | Plus |
| 3L | 4173338..4173387 | 1417..1466 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:14 Download gff for
BS23947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4170652..4170792 | 17..157 | 100 | -> | Plus |
| arm_3L | 4171214..4171477 | 158..421 | 100 | -> | Plus |
| arm_3L | 4172225..4172910 | 422..1107 | 100 | -> | Plus |
| arm_3L | 4172968..4173276 | 1108..1416 | 100 | -> | Plus |
| arm_3L | 4173338..4173387 | 1417..1466 | 100 | | Plus |
BS23947.pep Sequence
Translation from 16 to 1467
> BS23947.pep
MTTRTVQRNLWASAAVVLVLLLLWTDTTGGYFAAIDETETSKNCFCELEG
SINDCSCDVDTVDHFNNMKIYPRLQSLLVKNFFRFYKVNLRQECPFWPDD
SRCAMRFCQVENCEEQAIPQGIKDKGEHKEKAAFKYTREAQVGGSACSDG
EDFDSSLGFLDTSISDQAHREFELWAKHDEAEEDFCIVDDHEEGSQYVDL
LLNPERYTGYKGESAHRIWKSIYLENCFGGNNETANKFSNYVPHLDLRNV
CLEQRAFYRIISGLHSSINIHLCSKYLLSESKDFLDPQGIWGPNVKEFKR
RFSPETTSGEGPHWLRNLYFIYLIELRALAKAAPYLRREDYYTGIAEEDD
EVKLAINDMLSVIENFQSHFDENALFSNGIASIKFKHDYKEKFRNISRIM
SCVGCDKCKLWGKLQTQGLGTALKILYSEKLNLATESGLWDKPHIEADPI
FRLSRTEIVALFNAFGRLSNSIYEMENFRCVLR*
BS23947.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:07:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ero1L-PB | 483 | CG1333-PB | 1..483 | 1..483 | 2594 | 100 | Plus |
