BS23951.complete Sequence
1295 bp assembled on 2011-01-28
GenBank Submission: KX804563
> BS23951.complete
GAAGTTATCAGTCGACATGAGCGCGCCGAGCAACAAAATGTCGGCCACCG
ATCAGATGCGAGCAATGCTGGACCAGCTTATGGGTACCACACGGAATGGC
GACGAGCGCCAACTGAAATTCTCGGACCCCAGGGTCTGCAAGTCCTTTCT
GCTCGACTGCTGTCCGCACGACATCCTGGCGTCCACGCGCATGGATCTCG
GTGAGTGTCCCAAAGTGCATGACCTGGCTTTCCGCGCAGATTACGAAAGT
GCCGCCAAGACGCGCGACTACTACTACGACATTGAGGCCATGGAACACCT
GCAGGCCTTTATTGCCGACTGCGATCGACGCACCGACTCCGCCAAGCAAA
GGTTGAAAGAGACCCAGGAAGAGCTGACCGCCGAGGTGGCTGAGAAGGCC
AATGCTGTCCATGGCCTCGCCGAGGAGATTGGCAAGAAGTTGGCCAAGGC
CGAGGCCCTGGGCGAGGCCGGCGAAGTGGAGGACAGCATGGAGCTGATGA
AGGAGATCGAGGAGCTGCGTGCTAAGAAGATCAAGGCCGAGCACGAGTAC
CGCACATCTATGCCCGCATCCACCTACCAGCAGCAAAAGTTGCGCGTCTG
CGAGGTATGCTCCGCCTACCTCGGGATTCACGACAATGACATACGTCTGG
CGGACCACTTTGGTGGTAAGTTACATCTCGGATTCCTCACTATCAGAGAA
AAGCTGATCGAACTGGAGAAGACGGCGGCGCCGCGGAAGGCGGAGCTCAA
GCGGACGGGTAAGATGACGGACCGCGAGGACGAGGGACGCGGACGCAATC
GCTACTTTGTAGGTGGTCGTGAACTGGACCGCCGCTCTCGCGTACATCGT
TCCCGATCCAGAGAACGACAGCGCAACCGGGATGGGGACCGCGAACGCCC
CAACAACGGACGCGGTCCTGAGGAGAAGGGGAGTGAGCGACCCAAGGAAG
CGGCAGATGGTCCGGAGCGAGCCGAAAGGGCACCAGATCGTGGAGGACGG
CGAGATGACAGGGACAACCACGGCAGGGATCATCGCGAACGGGAACGCGA
TGGCAGGCGGGATCGGGACCGACATGGACGCAACGACAGAGGACGCTTTG
GTGACAGAGGCGGCGGTGGAGGAGGCGGTGGCCATCACCGTGACGACAGA
CGCCGCTCAAGGTCCAGGGAACGCTCGCCACGCGAACGGCGGAACTTTAA
CCACTTCAGGGATGGTGGTGGCGGCGGAAATGGCCAGCGCAAACGATCCT
ACTCCCGTGAGCGCAACTACCGCCGCTAGAAGCTTTCTAGACCAT
BS23951.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7564-RD | 1263 | CG7564-PD | 1..1263 | 17..1279 | 6300 | 99.9 | Plus |
| CG7564-RB | 1263 | CG7564-PB | 1..1263 | 17..1279 | 6300 | 99.9 | Plus |
| CG7564-RC | 1263 | CG7564-PC | 1..1263 | 17..1279 | 6300 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7564-RD | 10443 | CG7564-RD | 171..1433 | 17..1279 | 6300 | 99.9 | Plus |
| CG7564-RB | 2639 | CG7564-RB | 171..1433 | 17..1279 | 6300 | 99.9 | Plus |
| CG7564-RC | 1672 | CG7564-RC | 171..1433 | 17..1279 | 6300 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17514468..17515730 | 17..1279 | 6300 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:06:24 has no hits.
BS23951.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:36 Download gff for
BS23951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 170..1432 | 17..1279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:29 Download gff for
BS23951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 171..1433 | 17..1279 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:21 Download gff for
BS23951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RC | 171..1433 | 17..1279 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:21 Download gff for
BS23951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17514468..17515730 | 17..1279 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:29 Download gff for
BS23951.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17507568..17508830 | 17..1279 | 99 | | Plus |
BS23951.pep Sequence
Translation from 16 to 1278
> BS23951.pep
MSAPSNKMSATDQMRAMLDQLMGTTRNGDERQLKFSDPRVCKSFLLDCCP
HDILASTRMDLGECPKVHDLAFRADYESAAKTRDYYYDIEAMEHLQAFIA
DCDRRTDSAKQRLKETQEELTAEVAEKANAVHGLAEEIGKKLAKAEALGE
AGEVEDSMELMKEIEELRAKKIKAEHEYRTSMPASTYQQQKLRVCEVCSA
YLGIHDNDIRLADHFGGKLHLGFLTIREKLIELEKTAAPRKAELKRTGKM
TDREDEGRGRNRYFVGGRELDRRSRVHRSRSRERQRNRDGDRERPNNGRG
PEEKGSERPKEAADGPERAERAPDRGGRRDDRDNHGRDHRERERDGRRDR
DRHGRNDRGRFGDRGGGGGGGGHHRDDRRRSRSRERSPRERRNFNHFRDG
GGGGNGQRKRSYSRERNYRR*
BS23951.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7564-PD | 420 | CG7564-PD | 1..420 | 1..420 | 2221 | 100 | Plus |
| CG7564-PB | 420 | CG7564-PB | 1..420 | 1..420 | 2221 | 100 | Plus |
| CG7564-PC | 420 | CG7564-PC | 1..420 | 1..420 | 2221 | 100 | Plus |
| CG7564-PA | 420 | CG7564-PA | 1..420 | 1..420 | 2221 | 100 | Plus |
| CG3198-PA | 438 | CG3198-PA | 3..177 | 12..178 | 238 | 32.6 | Plus |
