BS23956.complete Sequence
947 bp assembled on 2011-01-28
GenBank Submission: KX804325
> BS23956.complete
GAAGTTATCAGTCGACATGAAGCTGCTCTATATGCTGTGGCTGCTGAGCA
TCTTGGTCCTGGTCTCAGGCCAGCAGAAGCAGACAGCTAACTCCGCCACC
AAGGACGCCCCAGTGGTGGCCAATGCGACGAACGTGCTGCAGGCCAAAGT
TATTCCAGGATCGAAATTGGAATCTGGATCTCCGGGAGCTGCCAGCCAGC
TGGTGCCGGGTAAGGATGCAGCTGTGTTGCAACAGGACAAGAACTTAAAC
AAAACGGCCACAGCAGAAAATGCAGGTAAAGCCAAAAATCTCACAAACAC
CGATACAGGAGTGCCCACCATTCCTTTGGTCACTTCCAAGCCGGCTGTGG
AGCAAAAGGCGGCCAAGGAGGCGACCAATACGACCTCCACTACAACTTCT
TCCACCACGACCACCACCACCACGGCAAAGCCAGCTGCAGGATCAGCCAT
AGTCACCGAGGGCCAGTCCATGAAGGATGTCACCAAGCCGAGCAACTCGT
CCACCAACGGCGCGGCAATATCCCCGACCAACAGCACCCACACCGCCACA
GCCACCACCAAAACTGTCAATTCAACCATCATCGCAACCACGCCAAAGCC
GAAGAAGCCCCCAGTGGTATTGAGCACTGATATACACCAGGAGGGGGAGG
ATATGGCGGAGCTGGAAAAGAGTCAGGATAAGCCAGGTACAAAGGGCGCT
CCCACCCAGCCATTGGCCACACCACCAGAGCCATTGGTGCAGGGGCTTAC
TGGAAGTAATCTTGCCGATCACGGAGAGAACGGGTATGTGGTACCCATTG
TTACCGTGCTGCTGACCGTTCCGCTGGCCATCGGCGTGGTGACCATCATG
TACCGCCGCTTCCGCGACATGTGGAGCACCAGGCACTACCGTCGCATGGA
CTTCCTGGTGGACGGCATGTACAACGACTGAAAGCTTTCTAGACCAT
BS23956.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:06:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7453-RA | 915 | CG7453-PA | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7453-RA | 1852 | CG7453-RA | 107..1021 | 17..931 | 4575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19180279..19181193 | 17..931 | 4575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:06:55 has no hits.
BS23956.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:37 Download gff for
BS23956.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7453-RA | 102..1015 | 17..930 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:39 Download gff for
BS23956.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7453-RA | 107..1020 | 17..930 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:31 Download gff for
BS23956.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7453-RA | 107..1020 | 17..930 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:31 Download gff for
BS23956.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19180279..19181192 | 17..930 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:39 Download gff for
BS23956.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19074312..19075225 | 17..930 | 100 | | Plus |
BS23956.pep Sequence
Translation from 16 to 930
> BS23956.pep
MKLLYMLWLLSILVLVSGQQKQTANSATKDAPVVANATNVLQAKVIPGSK
LESGSPGAASQLVPGKDAAVLQQDKNLNKTATAENAGKAKNLTNTDTGVP
TIPLVTSKPAVEQKAAKEATNTTSTTTSSTTTTTTTAKPAAGSAIVTEGQ
SMKDVTKPSNSSTNGAAISPTNSTHTATATTKTVNSTIIATTPKPKKPPV
VLSTDIHQEGEDMAELEKSQDKPGTKGAPTQPLATPPEPLVQGLTGSNLA
DHGENGYVVPIVTVLLTVPLAIGVVTIMYRRFRDMWSTRHYRRMDFLVDG
MYND*
BS23956.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7453-PA | 304 | CG7453-PA | 1..304 | 1..304 | 1533 | 100 | Plus |
CG34220-PA | 726 | CG34220-PA | 253..401 | 91..239 | 154 | 26.8 | Plus |
CG34220-PA | 726 | CG34220-PA | 79..233 | 80..239 | 152 | 27 | Plus |