BS23972.complete Sequence
3785 bp assembled on 2011-02-18
GenBank Submission: KX803336
> BS23972.complete
GAAGTTATCAGTCGACATGGATTTTATGGTGCCGATTCACACAATGTCCG
ATGGATCACCGCCTCCATCGATTTGCTTTATCCGTGCCGCCGAATCGTAT
CCAAAGTCACAAATGGAGAAGGAAGACTCCCAGCTGTTCGTCCCGTTTCA
AGAGTTGGCCGGCGAATCGATTAAGTACCTGGGGCGCACGGATGATGGTA
TCCTCGCCCTGTCCAATTATCGGATATTCCTTTCCAAGCAGTCAACCGGC
TACGAGACCTACGTTCCATTGGGATTAATCGAATCCGTACAGGTGCGAGA
TCTGTTCCAGCTGATTGTCAATTGTAAGGATGCCAGCACTGTGCGCTGCT
CCTTTCCGTCGGCGGAACAGTGCTCCGACTGGCAGCGCCGGATCCATCTG
ATGATCGGGGTTCCCGAGTCACTGGAGACACTCTTCGCCTTTCCCTTCTA
CTCCTGGACCTGCGATGTGCTCGGAAGTGGCAATGGAAGCGGTATCGTTA
GCGCCCAGGCCAACGGAAACGGCCTGATTGCCAAGGATCGTTGCCTAACG
CTACACAATGGCTTGGCAAAGCCAACAGCCAACGTCACAGCGTCGAATCC
TCTGCCCGATCCTGCCAGCGAGACCATCTCAGCCGCCATGAGCAATCGCC
TGCAACGATCAGTGCGCTATGAAAGCGACTTTAAGAACGAGGTTGCCCGC
TTGGGATTCGATCTGAAGGGCTCGTGGCGCATCTCCACGGCCAATGCCGA
TTTTAAGCTCTGTCCCTCGTATCCACCCAAATTGCTTGTGCCCTGCTGTA
TCACCGATGAGATGCTCCACAACGTGGCCAACTTCCGGGGATCACGAAGG
CTGCCGGCTGTCGTCTGGCGGCACCAAAAGTCGGGTGCCATCTTGGCCCG
ATGCAGCCAGCCGGAGGTCGGTTGGCTCGGCTGGCGCAACACAAGGGACG
AGCAGCTACTCAAGGCACTCGCCGATGCCTGTGCCTTTGACAGGGGCGAG
CACGCCAGGCATTCCACCTGCGCCAATGCAAAGGCGCAACCAACAAAGGG
CTCCAAGGAGACCAACGGCCAGTCGGGCTTATCCGGCAAGAGTTCACCAT
CTCTGGACGATTCCTCGCATGAGGAACTCACGCTGGATGAAATCAAGAAA
ATCCTCATTGTGGATGCTCGCAGCTACACCTCCGCAGTTACAAATCGTGC
CAGAGGTGGCGGCTGTGAGTGCATCGAGTACTATCCCTGTGCAGAGATTG
AGTTTATGAACTTGGGCAACATCCACGCCATTCGAAAGAGTTTCCACGCT
GTCCGACAGCTATGCGCGTCATCCCCCGATGATCCAAACTGGTACGGACA
ACTGGAAAAGACCATGTGGATGCAGCACCTGTCGGGTCTGCTGGGAGCCA
CCATGACCGTTGTGCACACCATCGAGAAGAATGGACGACCCGTCCTTGTA
CATTGCTCAGACGGTTGGGATCGCACTCCACAGATCGTGGCCACGGCGCA
ATTATGTTTGGATCCCTACTACAGAACGGTTGAGGGGTTCCGCGTTCTTG
TCGAGCGTGAATGGCTGAACTTTGGACACAAATTCGCCGATCGCTCTGGA
AATGGTCCCAATTCCGATGAAGTTAACGAGCGATGTCCAGTTTTTCTGCA
GTGGCTTGATCTTGTGCATCAAATACACAGGCAGTATCCATGCAGTTTTG
AGTTTAGTATAAGCTATTTGATCAAACTGGCGCAACATTCGTTGTCCTGT
CTCTTCGGCACGTTCCTATGTAATTCGCTCAGAGAACGCATCGAGAATTC
AGTTTTCGACCGAACGTTTTCCGTGTGGCCATTTTTAGCGGAAACTATGT
ATAGAAATCCTCTCTATAAGCATGAGACTGAAAAGGTTCTTTGGCCAGCG
CACAGTGTGCGGTTTTTATATTTTTGGTCTGATGTATACCTTGGTAGTTT
AGGCAACAAAAATGGAACTGATCTACCATTACTAAGTAATGAAAGACAGA
GCGGACACAATGGCCTCATGGCGAAGACACGATCTTCTGAAGACTTAACA
ACGAATGAGTTGGGACAGAGCACCATTTCCAGGAGGTCCAGTGATCCCAA
CCTGACCGTTGAATCCATTGTTACAGATTGTTTCAATGCCAATAGCAACT
CGATGTTTGACATACGATCCGAGGCCAACAACAGTGTTAGCGAAAATGTC
CAAGAAAGTGTTAAAGACTCCAAAGAAGTAGAGCTGGACGTGACGGATGC
AACTGAAGTAGGTCCATGTGGCCGTTCAAATAATCCCATTCCAGATTTCC
ATAACGACCAAAGTACAGCTTCTAAACGTGATATATTGGAAGTGGAATCA
CAAACGCAAAGGCGAAGTTCCTTGGAGTCCTCACAGCTGATCCCTGGGTC
TGTCTTCATTTTTGGCTCATCCGAAAACGATAAAAATGCAGTTCCTTCGG
AATCTGAAGAATCCTTGGCGACCTCACAGAAACTGAACTCTGAATCTGGG
CGACCTTTTTTCATATTTGGTTCATCCGAAAACGATCAAAGTCCAGTTCC
TTTAAAATCTGAAGACACAAGTGATATTTCTCGCGCCCTGTGGCATGGCG
CAATTGAAACCAGCACTGATACCCTTATTCCTGCGGAGCCCGTACAAAAA
CCAAACAGCGACAATAGCAGTAGAGATCACATAACATCCCCCACAATGGA
ACTGGTCAGTGGTGATAGAAAGCTGGAGTCGACTAGCACTGTCCAAGCCA
GTAAAATCAGTCAGAGCTACAATAATTTGCCCAAGGTACACATAAGACCG
AATGCCGTTATATGCCCGCAGCGGGTAGACGCTTTTCCCCATCACCTGGA
CCTACAAGTGCCAAGGGAGACGACGGGAAATCCGGACCGTTGCAAGCCGG
AAAAGTTAGCCAAAGATGCAAATGCGAATGCCAATGCCAACGGATCCCTG
CTGGCATCCGATGGCTACAACGGCGAGGAAAGTCTCTTTATATCACCCGA
CCTTCAGCGGTTCGTGGGCCAGTCGCCATTCGATGCTCCCTCGACGGGCG
GACGAATACGGCGAAATACCTTCGGCTCGAGCTACAGTCGCGATATGAAG
TTCACGGCTGAAAATGGCAGCGCACACCAATTTCCGTCGTCGGGGATCAT
TTCGTTGCCCCCAACACCATTTCAGGAGAGGGCTCAGTTCACTATATCCT
GTCCAGATGGCCTGGCTCACGGACTCAGCGAACAAAACATAAGACTCCAC
CAAATCGTACAAGAACACAAGCTACGTGAGGAAATGCTACTGCGAGAAAT
ACACGGTATGCGACTGGCTCTGTTGGAAAAAGGTTGCCCCAGCTGCAACA
GCATCGTTTCGACAAATATGGAACATGAAAATGGATCGGATATCGTTGAA
AATGCTTCAACATGTTCCTGGGAGGCCGTCGAAGAACGTAGTGGTCCCGC
CTCGTATGCCCCTTCCTCGATTCAAGAGAAAAAAGCCTCCAGTGTCCTCT
GGGTGCCAGACCATGCAGTTTCGCGTTGCTCTAGTTGTCAAACTGAGTTC
TGGCTTGGACGAAGAAAACATCATTGTCGATCTTGTGGAGAAATTTTTTG
TGCTGACTGCTCGGAGTTTTGGGCGCCGTTGCCAAACGAAAAGCTTTTTA
ACCCAGTTAGGCTATGTGGATCCTGCTACACGAGCGTCACGACCAATGTC
CAGGAGTACGCTGCGGTACCTGCAGAATCCCAGGCGAAGGACGATGAGAC
GTCTTCTGCGATTTCCTAAAAGCTTTCTAGACCAT
BS23972.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3632-RE | 3753 | CG3632-PE | 1..3753 | 17..3769 | 18765 | 100 | Plus |
| CG3632-RI | 3726 | CG3632-PI | 1..3726 | 44..3769 | 18630 | 100 | Plus |
| CG3632-RH | 3726 | CG3632-PH | 1..3726 | 44..3769 | 18630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3632-RE | 4070 | CG3632-RE | 106..3858 | 17..3769 | 18765 | 100 | Plus |
| CG3632-RI | 4198 | CG3632-RI | 248..3986 | 31..3769 | 18695 | 100 | Plus |
| CG3632-RH | 4174 | CG3632-RH | 224..3962 | 31..3769 | 18695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16297849..16298840 | 156..1147 | 4960 | 100 | Plus |
| X | 23542271 | X | 16300938..16301524 | 2534..3120 | 2935 | 100 | Plus |
| X | 23542271 | X | 16300398..16300714 | 2119..2435 | 1570 | 99.7 | Plus |
| X | 23542271 | X | 16302210..16302412 | 3377..3579 | 1015 | 100 | Plus |
| X | 23542271 | X | 16299276..16299472 | 1339..1535 | 985 | 100 | Plus |
| X | 23542271 | X | 16299018..16299210 | 1146..1338 | 965 | 100 | Plus |
| X | 23542271 | X | 16302906..16303096 | 3579..3769 | 955 | 100 | Plus |
| X | 23542271 | X | 16299538..16299725 | 1533..1720 | 940 | 100 | Plus |
| X | 23542271 | X | 16299794..16299961 | 1720..1887 | 840 | 100 | Plus |
| X | 23542271 | X | 16301598..16301751 | 3118..3271 | 770 | 100 | Plus |
| X | 23542271 | X | 16300029..16300158 | 1884..2013 | 650 | 100 | Plus |
| X | 23542271 | X | 16297660..16297784 | 31..155 | 625 | 100 | Plus |
| X | 23542271 | X | 16301811..16301923 | 3270..3382 | 550 | 99.1 | Plus |
| X | 23542271 | X | 16300225..16300331 | 2012..2118 | 535 | 100 | Plus |
| X | 23542271 | X | 16300770..16300875 | 2429..2534 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:32:55 has no hits.
BS23972.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:55 Download gff for
BS23972.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3632-RE | 64..3814 | 17..3767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:02:09 Download gff for
BS23972.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3632-RE | 106..3856 | 17..3767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:51 Download gff for
BS23972.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3632-RE | 106..3856 | 17..3767 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:51 Download gff for
BS23972.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16300398..16300708 | 2119..2429 | 100 | -> | Plus |
| X | 16300771..16300875 | 2430..2534 | 100 | -> | Plus |
| X | 16299020..16299210 | 1148..1338 | 100 | -> | Plus |
| X | 16299276..16299471 | 1339..1534 | 100 | -> | Plus |
| X | 16297661..16297784 | 32..155 | 100 | -> | Plus |
| X | 16297849..16298840 | 156..1147 | 100 | -> | Plus |
| X | 16300939..16301524 | 2535..3120 | 100 | -> | Plus |
| X | 16301601..16301751 | 3121..3271 | 100 | -> | Plus |
| X | 16301813..16301917 | 3272..3376 | 100 | -> | Plus |
| X | 16302210..16302412 | 3377..3579 | 100 | -> | Plus |
| X | 16302907..16303094 | 3580..3767 | 100 | | Plus |
| X | 16299540..16299725 | 1535..1720 | 100 | -> | Plus |
| X | 16299795..16299959 | 1721..1885 | 100 | -> | Plus |
| X | 16300031..16300157 | 1886..2012 | 100 | -> | Plus |
| X | 16300226..16300331 | 2013..2118 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:02:09 Download gff for
BS23972.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16193828..16193992 | 1721..1885 | 100 | -> | Plus |
| arm_X | 16194064..16194190 | 1886..2012 | 100 | -> | Plus |
| arm_X | 16194259..16194364 | 2013..2118 | 100 | -> | Plus |
| arm_X | 16191694..16191817 | 32..155 | 100 | -> | Plus |
| arm_X | 16191882..16192873 | 156..1147 | 100 | -> | Plus |
| arm_X | 16193053..16193243 | 1148..1338 | 100 | -> | Plus |
| arm_X | 16193309..16193504 | 1339..1534 | 100 | -> | Plus |
| arm_X | 16193573..16193758 | 1535..1720 | 100 | -> | Plus |
| arm_X | 16194431..16194741 | 2119..2429 | 100 | -> | Plus |
| arm_X | 16194804..16194908 | 2430..2534 | 100 | -> | Plus |
| arm_X | 16194972..16195557 | 2535..3120 | 100 | -> | Plus |
| arm_X | 16195634..16195784 | 3121..3271 | 100 | -> | Plus |
| arm_X | 16195846..16195950 | 3272..3376 | 100 | -> | Plus |
| arm_X | 16196243..16196445 | 3377..3579 | 100 | -> | Plus |
| arm_X | 16196940..16197127 | 3580..3767 | 100 | | Plus |
BS23972.pep Sequence
Translation from 16 to 3768
> BS23972.pep
MDFMVPIHTMSDGSPPPSICFIRAAESYPKSQMEKEDSQLFVPFQELAGE
SIKYLGRTDDGILALSNYRIFLSKQSTGYETYVPLGLIESVQVRDLFQLI
VNCKDASTVRCSFPSAEQCSDWQRRIHLMIGVPESLETLFAFPFYSWTCD
VLGSGNGSGIVSAQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPA
SETISAAMSNRLQRSVRYESDFKNEVARLGFDLKGSWRISTANADFKLCP
SYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGAILARCSQPE
VGWLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETN
GQSGLSGKSSPSLDDSSHEELTLDEIKKILIVDARSYTSAVTNRARGGGC
ECIEYYPCAEIEFMNLGNIHAIRKSFHAVRQLCASSPDDPNWYGQLEKTM
WMQHLSGLLGATMTVVHTIEKNGRPVLVHCSDGWDRTPQIVATAQLCLDP
YYRTVEGFRVLVEREWLNFGHKFADRSGNGPNSDEVNERCPVFLQWLDLV
HQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIENSVFDRT
FSVWPFLAETMYRNPLYKHETEKVLWPAHSVRFLYFWSDVYLGSLGNKNG
TDLPLLSNERQSGHNGLMAKTRSSEDLTTNELGQSTISRRSSDPNLTVES
IVTDCFNANSNSMFDIRSEANNSVSENVQESVKDSKEVELDVTDATEVGP
CGRSNNPIPDFHNDQSTASKRDILEVESQTQRRSSLESSQLIPGSVFIFG
SSENDKNAVPSESEESLATSQKLNSESGRPFFIFGSSENDQSPVPLKSED
TSDISRALWHGAIETSTDTLIPAEPVQKPNSDNSSRDHITSPTMELVSGD
RKLESTSTVQASKISQSYNNLPKVHIRPNAVICPQRVDAFPHHLDLQVPR
ETTGNPDRCKPEKLAKDANANANANGSLLASDGYNGEESLFISPDLQRFV
GQSPFDAPSTGGRIRRNTFGSSYSRDMKFTAENGSAHQFPSSGIISLPPT
PFQERAQFTISCPDGLAHGLSEQNIRLHQIVQEHKLREEMLLREIHGMRL
ALLEKGCPSCNSIVSTNMEHENGSDIVENASTCSWEAVEERSGPASYAPS
SIQEKKASSVLWVPDHAVSRCSSCQTEFWLGRRKHHCRSCGEIFCADCSE
FWAPLPNEKLFNPVRLCGSCYTSVTTNVQEYAAVPAESQAKDDETSSAIS
*
BS23972.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:30:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3632-PE | 1250 | CG3632-PE | 1..1250 | 1..1250 | 6610 | 100 | Plus |
| CG3632-PI | 1241 | CG3632-PI | 1..1241 | 10..1250 | 6560 | 100 | Plus |
| CG3632-PH | 1241 | CG3632-PH | 1..1241 | 10..1250 | 6560 | 100 | Plus |
| CG3632-PG | 1241 | CG3632-PG | 1..1241 | 10..1250 | 6560 | 100 | Plus |
| CG3632-PF | 1241 | CG3632-PF | 1..1241 | 10..1250 | 6560 | 100 | Plus |
