BS23988.complete Sequence
1100 bp assembled on 2011-02-03
GenBank Submission: KX801464
> BS23988.complete
GAAGTTATCAGTCGACATGGCAGCTAGCAAATTCCATTGCGGCAAGCAAT
TGACAGCCACACATTCACATTTCGATGCGACATGTGCGAAAATCAGGGCC
TTTTACTTTGACCTGGACAACACGTTGATTCCCACCAGAGCCGGCGATTC
CAAGGCGATCAGAAAGCTCGCTGATTTTCTGGAGACCCAATACCAGTTCA
GCAAAGATGACGCAACACAGGCCACCCAAAACTTTCTAAAGGCCTTCCGC
CGCTGTCCCGATAACTCGCAAACATCGCTGGACTCGTGGCGCACTCACCT
GTGGCGCGAATCCCTTCCAGCGCGCCACAAGCACCTGGCGGAACAGATCT
ATCCCAAGTGGCTGAAGTTGCGGTATCGCTACCTAGCCGTTCCGGCGGAC
TATGTCCAGCTGCTGCTGCGGATGCGCCAGGCAGGCTATGCCCTGGCCCT
CATCACCAACGGACCGTCGAACGCTCAGTGGGAGAAGGTGGCTGAGCTGA
ATGTGCGCGGCTACTTTGACTGCGTGCTGGTCTCATCGGATCTGCCATGG
GAGAAACCGCATCCGGAGATCTTCTATGCCGCCTGCAACTTTCTCAATGT
CAAGCCGCAGGAGTGCGTCATGATCGGCGACAAACTGGAGACCGACATCA
AGGGCGGTCACTTGGCCCAGCTGGGTCTCACATTCTGGACGCCACTAAGC
AATAGCAGCGCGGCGGCACAATCGCTAGAGGATGTGGAGTACAAGCCGCA
CGTCAAGCTGGGCAGCCTGCTGGAGATGTACAAGTACTTTCCGCGCCTCA
ACTCAGTCGCTCTGCCCGAGATGCCGTCGGTTTCCAGAAGACGTGGCAGC
CACATGAGTCCCATTAGCCAGGGCTCCGGCAGCGGAAGCAGCTCCAGCGC
CATTTGTGTGCCGGGTGCTGGCCATGGATACCATCACCACCACCACCAGC
AGCACCAGGAGCAGCAGCAGCAGCATCATCATCATCATCATCAGAGGCAG
TGGCTTTATCGACGAGGCGTTTCACTGCCCGCCATGGATTGCTCCAATAG
CGAGGCGGAGAACAGCTGCGACAGTTTTCTGTAGAAGCTTTCTAGACCAT
BS23988.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15771-RD | 1068 | CG15771-PD | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| CG15771-RA | 1068 | CG15771-PA | 1..1068 | 17..1084 | 5340 | 100 | Plus |
| CG15771-RC | 663 | CG15771-PC | 1..663 | 422..1084 | 3315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15771-RD | 2464 | CG15771-RD | 481..1549 | 16..1084 | 5345 | 100 | Plus |
| CG15771-RA | 2290 | CG15771-RA | 307..1375 | 16..1084 | 5345 | 100 | Plus |
| CG15771-RC | 2292 | CG15771-RC | 456..1377 | 163..1084 | 4610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:06:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5757860..5758348 | 165..653 | 2445 | 100 | Plus |
| X | 23542271 | X | 5758403..5758836 | 651..1084 | 2170 | 100 | Plus |
| X | 23542271 | X | 5756054..5756204 | 16..166 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:06:26 has no hits.
BS23988.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-03 10:47:21 Download gff for
BS23988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15771-RA | 418..1485 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:46:58 Download gff for
BS23988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15771-RA | 308..1375 | 17..1084 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:51:23 Download gff for
BS23988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15771-RA | 308..1375 | 17..1084 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:51:23 Download gff for
BS23988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5756055..5756204 | 17..166 | 100 | -> | Plus |
| X | 5757862..5758347 | 167..652 | 100 | -> | Plus |
| X | 5758405..5758836 | 653..1084 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:46:58 Download gff for
BS23988.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5650088..5650237 | 17..166 | 100 | -> | Plus |
| arm_X | 5651895..5652380 | 167..652 | 100 | -> | Plus |
| arm_X | 5652438..5652869 | 653..1084 | 100 | | Plus |
BS23988.pep Sequence
Translation from 16 to 1083
> BS23988.pep
MAASKFHCGKQLTATHSHFDATCAKIRAFYFDLDNTLIPTRAGDSKAIRK
LADFLETQYQFSKDDATQATQNFLKAFRRCPDNSQTSLDSWRTHLWRESL
PARHKHLAEQIYPKWLKLRYRYLAVPADYVQLLLRMRQAGYALALITNGP
SNAQWEKVAELNVRGYFDCVLVSSDLPWEKPHPEIFYAACNFLNVKPQEC
VMIGDKLETDIKGGHLAQLGLTFWTPLSNSSAAAQSLEDVEYKPHVKLGS
LLEMYKYFPRLNSVALPEMPSVSRRRGSHMSPISQGSGSGSSSSAICVPG
AGHGYHHHHHQQHQEQQQQHHHHHHQRQWLYRRGVSLPAMDCSNSEAENS
CDSFL*
BS23988.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:03:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15771-PD | 355 | CG15771-PD | 1..355 | 1..355 | 1922 | 100 | Plus |
| CG15771-PA | 355 | CG15771-PA | 1..355 | 1..355 | 1922 | 100 | Plus |
| CG15771-PC | 220 | CG15771-PC | 1..220 | 136..355 | 1200 | 100 | Plus |
