BS23994.complete Sequence
971 bp assembled on 2011-01-28
GenBank Submission: KX800500
> BS23994.complete
GAAGTTATCAGTCGACATGAACACACCAGTGATTTCGGTGGTGCCAAAGG
AATTCAGTCTCAGAAATCACCAATCCACCAACCCAGCCACCAGCATGAAG
TTCTTCGTTGCCACCGCCTGCATCCTGCTCCTGGCAGCAGGTATCTCTGC
CGATCCCGTCAAGGCCGCTGAGGAGCAGCCCGGCGCCTTTGCCCAGTGCC
TCGAGTCCGACTCCATCTCGTGCCTGCAGCTCACGCTCTTCCGCAAGGCC
AAGTCCGTGTTCGATAACCCTCAGATCGAGCTTTTCGGTGGTGTTTCTCT
GGTGAAGTCCAATGAAGGTCGTCAGGGCAAGTCCCTGGACAACTCCCTGG
CTGTTGAGGCCGCTCCCACCGTGGAGGCCCGCACCGCCGAGATGGGCAAC
TACTTCATGGACAACGCCAAGAGCTTCTTCGCTGAACGCTCCCTGAACTT
CAACTTCGCTAACGCCGCTCGCAGCGTGGCCCGCGCCATTCCCGATGACA
TCAAGGCTGATCTCCGCGAGCTGGTTGTTGAGTCCCGTACCCGCAAGAAG
AAGCTGCTGAAGAAGTTCCTGCCCATCCTGCTGGGAGTTGGTGCTAAGAT
CGCCGTCCTTGGAGTCGGCTCCATCTTCGGACTACTGTTCCTGGCCAAGA
AGGCACTGGTTGTGTCTGTTATCGCCTTCTTCCTGGCTCTGGCTGCTGGT
GCTTCCAGCGGACTGGGACGCATCGGTGGATCCGGAGGCGGCGGCGGTCT
GCTCGGCGGTCTGGGAGGTCTCTTCGGCGGCAAGAACGCCGGTGGATCGT
CGGCTGCCAGCACCGGTGGATGGTCCTCGGGTGGTGGTGCCTCCAGCGCC
GGATGGTCCTCTGGCGGCAGCTCGGGTTGGGACACCCATGGTGCCTACAG
CTCGCCTGTGGCCCAGACCATCGCCTACCAGGGATACAAGCAGGCCCGCC
GGTAAAAGCTTTCTAGACCAT
BS23994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:04:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-RB | 939 | CG1151-PB | 1..939 | 17..955 | 4695 | 100 | Plus |
| Osi6-RA | 939 | CG1151-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-RB | 1846 | CG1151-RB | 29..968 | 17..956 | 4700 | 100 | Plus |
| Osi6-RA | 1545 | CG1151-RA | 29..968 | 17..956 | 4700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6235582..6236303 | 235..956 | 3610 | 100 | Plus |
| 3R | 32079331 | 3R | 6234736..6234954 | 17..235 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:04:55 has no hits.
BS23994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:34 Download gff for
BS23994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 28..964 | 17..953 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:51:53 Download gff for
BS23994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 29..965 | 17..953 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:10:46 Download gff for
BS23994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 29..965 | 17..953 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:10:46 Download gff for
BS23994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6234736..6234954 | 17..235 | 100 | -> | Plus |
| 3R | 6235583..6236300 | 236..953 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:51:53 Download gff for
BS23994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2060458..2060676 | 17..235 | 100 | -> | Plus |
| arm_3R | 2061305..2062022 | 236..953 | 100 | | Plus |
BS23994.pep Sequence
Translation from 16 to 954
> BS23994.pep
MNTPVISVVPKEFSLRNHQSTNPATSMKFFVATACILLLAAGISADPVKA
AEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSLVKSNE
GRQGKSLDNSLAVEAAPTVEARTAEMGNYFMDNAKSFFAERSLNFNFANA
ARSVARAIPDDIKADLRELVVESRTRKKKLLKKFLPILLGVGAKIAVLGV
GSIFGLLFLAKKALVVSVIAFFLALAAGASSGLGRIGGSGGGGGLLGGLG
GLFGGKNAGGSSAASTGGWSSGGGASSAGWSSGGSSGWDTHGAYSSPVAQ
TIAYQGYKQARR*
BS23994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-PB | 312 | CG1151-PB | 1..312 | 1..312 | 1562 | 100 | Plus |
| Osi6-PA | 312 | CG1151-PA | 1..312 | 1..312 | 1562 | 100 | Plus |
| Osi14-PA | 268 | CG1155-PA | 1..254 | 27..306 | 206 | 29 | Plus |
| Osi12-PA | 295 | CG1154-PA | 59..268 | 63..309 | 174 | 28.9 | Plus |
| CG34327-PA | 220 | CG34327-PA | 64..122 | 226..293 | 163 | 54.4 | Plus |
