BS24011.complete Sequence
782 bp assembled on 2011-02-03
GenBank Submission: KX806394
> BS24011.complete
GAAGTTATCAGTCGACATGCAGCCATTTATTGTCATTCGCAACTACACGC
AAGATGATGAGCTCAAGTGCCAGGAGCTGGTGCGGGACTACATCATGTCG
TTCTCGAATAAGTCCTTTTTTGTCTATTGCTTTCGAGAGATCACCCTGCA
GTTCATAGTCATCACGTGGGCCATATTCTTCATATTTCTGGGAGTGCCCC
TGCTTTTTTGTGCACTCACTGTGCCCGCTTGCATATTTTGCCTATTTACC
GGCACCTACTTCTCGTTTTACTCCAAGGCAGTGGAGTTGATGAGGACCAA
ACCATCGCAGTCTTTGGTGGCCGAGTGCTATGAACCCTTCATTTTCCGCT
GCTCACCGAAGGAAGCTAGCTACCAGATATTTACCGAGAACTGTCCATAC
GAGGAAACATACACGAGGAAATTCCGGCGCAGGATTGTGGCCGCTATTAG
TGTGAAGAATCACCACGCCGTATACAATGCTGCATGGATCTATCGCTTTG
CCATCGATCCCCATTACCCGTGTCAGACGATCATGGACCCCATGATAAAA
CTGGTGGTCAAGAACTGCATTATCGGCGGGTACGCCTCACTGGAGTGCAC
TATCTCCGAGTGGCAGGAAAGTGAGCGCGACTTTTATGATGATTTTGGGT
TCGTTACGCGGCAGATCTACCACAAAAAGATCATTGGCAGCAGTTTGGCA
GTGATGAAAACCCAGCTGACCTATGGGTTACGTACCGACGGAGCAGCTTT
GCACAAGCAAAACTAGAAGCTTTCTAGACCAT
BS24011.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32939-RA | 750 | CG32939-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
CG18542-RA | 750 | CG18542-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32939-RA | 1264 | CG32939-RA | 91..840 | 17..766 | 3750 | 100 | Plus |
CG18542-RA | 1263 | CG18542-RA | 90..839 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9686246..9686717 | 295..766 | 2360 | 100 | Plus |
3R | 32079331 | 3R | 9693566..9694037 | 295..766 | 2360 | 100 | Plus |
3R | 32079331 | 3R | 9686032..9686189 | 138..295 | 790 | 100 | Plus |
3R | 32079331 | 3R | 9693352..9693509 | 138..295 | 790 | 100 | Plus |
3R | 32079331 | 3R | 9685849..9685971 | 17..139 | 615 | 100 | Plus |
3R | 32079331 | 3R | 9693169..9693291 | 17..139 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:07:10 has no hits.
BS24011.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:34 Download gff for
BS24011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32939-RA | 91..840 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:30 Download gff for
BS24011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18542-RA | 90..839 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:18:55 Download gff for
BS24011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18542-RA | 90..839 | 17..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:18:55 Download gff for
BS24011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9685849..9685971 | 17..139 | 100 | -> | Plus |
3R | 9686034..9686189 | 140..295 | 100 | -> | Plus |
3R | 9686247..9686717 | 296..766 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:30 Download gff for
BS24011.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5511571..5511693 | 17..139 | 100 | -> | Plus |
arm_3R | 5511756..5511911 | 140..295 | 100 | -> | Plus |
arm_3R | 5511969..5512439 | 296..766 | 100 | | Plus |
BS24011.pep Sequence
Translation from 16 to 765
> BS24011.pep
MQPFIVIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVIT
WAIFFIFLGVPLLFCALTVPACIFCLFTGTYFSFYSKAVELMRTKPSQSL
VAECYEPFIFRCSPKEASYQIFTENCPYEETYTRKFRRRIVAAISVKNHH
AVYNAAWIYRFAIDPHYPCQTIMDPMIKLVVKNCIIGGYASLECTISEWQ
ESERDFYDDFGFVTRQIYHKKIIGSSLAVMKTQLTYGLRTDGAALHKQN*
BS24011.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32939-PA | 249 | CG32939-PA | 1..249 | 1..249 | 1335 | 100 | Plus |
CG18542-PA | 249 | CG18542-PA | 1..249 | 1..249 | 1335 | 100 | Plus |