BS24065.complete Sequence
2363 bp assembled on 2012-05-15
GenBank Submission: KX805878
> BS24065.complete
GAAGTTATCAGTCGACATGGGTCCTGCTCAGAAATCCGGAACAGATATTA
GTATCGATGATGAGGAGGAAATACTGGCTCTGGAAAAACTACTGGGTGCA
GCAGAAAACGAAAATACAAAATCTGCAGAGTCAGAAAAAGCAAAACCCAC
CGCACCCATTTTGGTGCCAAAACTACGAGAAGACAACAGTTTTGCTAATG
CCTTCACCTTCGAGAAGATCGTGAAACCGGAAAAGCAGAAGAATGCTGCT
ATCATTAAGGAACCAGAGCTGGACTCGTCCGACGACGAGGAGGTAAAGAA
CTTCCTGGAACGAAAGTACAATGAGTACGGCAGTGATATAAACAAGAGAC
TGAAGCAGCAGCAGGAGAACGCCTACGAGTCCAAGGTGGCGAGGGAGGTG
GATCAGGAGCTTAAGAAGTCTATCCACGTGGTTACATCCACCCCGCAACC
CCTGAAAAATCCGCATAATCCTATTAAACGGCAATCGGCGGTGAGCACCA
CGTTTCAACGTCCTCCGCCAGTCGCTGCCGCCGTGGCATCTACATCCCAG
TCAAGTGCTCCCGTATCTGCTGTTTTTACGGATCCAGTCTTCGGACTGCG
CATGATCAATCCGCTAGTCTCCAGCTCACTGCTGCAGGAGCGCATGACGG
GCAGGAAACCTGTGCCCTTCTCAGGCGTTGCGTATCACATCGAGCGAGGC
GATTTGGCCAAAGATTGGGTCATTGCTGGCGCGCTGGTTTCCAAAAATCC
TGTAAAAAACACCAAGAAGGGTGATCCCTACTCCACGTGGAAACTATCCG
ATCTACGGGGAGAGGTTAAAACGATCTCACTTTTCCTTTTTAAAGAGGCC
CACAAATCCCTGTGGAAAACAGCGGAGGGTCTGTGCTTGGCTGTGTTGAA
TCCAACTATTTTCGAGAGGAGAGCGGGAAGCTCCGATGTGGCCTGCCTAT
CCATCGATAGCTCCCAGAAAGTCATGATCCTGGGTCAATCCAAAGATTTG
GGCACATGTCGGGCCACCAAAAAAAATGGGGACAAGTGCACTTCGGTGGT
TAACCTAACCGACTGTGATTATTGCATTTTTCATGTAAAGCAGGAATATG
GCAAGATGTCCCGACGTTCTGAACTGCAATCGGCGACCGCAGGTCGTGGT
ATCAATGAACTAAGAAACAAGGTTTTGGGCAAAAACGAGGTATTTTACGG
CGGCCAAACATTTACTGCAGTTCCCGCAAGAAAAAGTGCCAAGTTAATCA
CCAAGGAACGTGATCGTCTGAGTATGCTGGCTGGCTATGATGTTTCCCCC
TTCGCCCATACCGCTAACCACACCTCAAAGCCCAAAACAGCCGAACCCAC
TAAAATTCCATATGCAGAACGTGGCGGTCCTGTTTCCCGTTTGGCTGGTG
GTGTGGAAGCGTCTAGGAAACAGAGAGTCCAAGATCTAGAGCGGTTGCGT
CTGCTTAAAGAGGAAAATGAGCGCTTTGAAAAAAAGAAGCAGGCGGAGGG
CCATGTCTTGGGAAGTGATAACAAAAAAGAATCTGAAGCAGGCACACCCG
CTGTCAGTATGCCCACTACACCTGTTCCAGATAAATTCAAAAATCGAGGC
TTCTCCTTTGATGCCAGTTTAACGCCCAAGCTTTCCGGTAGCGAGAACTT
TTCCTTTGAAATCAATGTAGGATCTCGCCAGGCACAAAATGCTAAGCTGA
AAGCAGCTGCCCTGCTGAAGAAGAAGCCACTGGAGAAGATCAACCCCAAC
TCCACACGAGGCAGTGAAAGTGGGAAGAGAAGAGCCATCGATGAACTCAA
CGAGAAGTTCTCTAGCAGCGCCAAGCGACAAAAAATTGATGAGGACGATC
GGGAGTTAATGCGCAAATCAAGAATCGAAAAAATAATGGCAGCCACCTCA
TCGCATACGAATCTCGTGGAAATGCGAGAGCGCGAAGCGCAGGAAGAGTA
CTTTAACAAGCTTGAACGCAAGGAAGCGATGGAAGAGAAGATGCTGACCA
CATACAAGATGCCATGCAAGGCCGTCATCTGCCAGGTGTGCAAGTACACA
GCCTTTTCCGCTTCCGATCGCTGCAAGGAGCAGAAGCACCCCTTAAAGGT
GGTCGATGCTGAAAAGCGATTCTTTCAGTGCAAAGACTGCGGAAATCGAA
CTACTACCGTATTCAAGTTGCCCAAACAGAGCTGTAAGAATTGCAAGGGG
TCGCGATGGCAAAGGACGGCTATGATACGGGAGAAAAAGATACTGACTGG
TAGAGAAACTCTATCCGTGAGAGGAGACGAGGAAACCTTTATGGGCTGCC
TAGCAGGCAGTGCTAATCTCAACTTGCTGGTACCCGATGAAGAGTGAAAG
CTTTCTAGACCAT
BS24065.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:19:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm10-RA | 2331 | CG9241-PA | 1..2331 | 17..2347 | 11655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:19:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm10-RA | 2820 | CG9241-RA | 99..2429 | 17..2347 | 11655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:19:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21181252..21182421 | 1178..2347 | 5850 | 100 | Plus |
| 2L | 23513712 | 2L | 21180031..21181193 | 17..1179 | 5815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:19:12 has no hits.
BS24065.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:29 Download gff for
BS24065.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm10-RA | 91..2420 | 17..2346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:40 Download gff for
BS24065.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm10-RA | 99..2428 | 17..2346 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:22 Download gff for
BS24065.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mcm10-RA | 99..2428 | 17..2346 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:22 Download gff for
BS24065.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21180031..21181192 | 17..1178 | 100 | -> | Plus |
| 2L | 21181253..21182420 | 1179..2346 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:40 Download gff for
BS24065.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21180031..21181192 | 17..1178 | 100 | -> | Plus |
| arm_2L | 21181253..21182420 | 1179..2346 | 100 | | Plus |
BS24065.pep Sequence
Translation from 16 to 2346
> BS24065.pep
MGPAQKSGTDISIDDEEEILALEKLLGAAENENTKSAESEKAKPTAPILV
PKLREDNSFANAFTFEKIVKPEKQKNAAIIKEPELDSSDDEEVKNFLERK
YNEYGSDINKRLKQQQENAYESKVAREVDQELKKSIHVVTSTPQPLKNPH
NPIKRQSAVSTTFQRPPPVAAAVASTSQSSAPVSAVFTDPVFGLRMINPL
VSSSLLQERMTGRKPVPFSGVAYHIERGDLAKDWVIAGALVSKNPVKNTK
KGDPYSTWKLSDLRGEVKTISLFLFKEAHKSLWKTAEGLCLAVLNPTIFE
RRAGSSDVACLSIDSSQKVMILGQSKDLGTCRATKKNGDKCTSVVNLTDC
DYCIFHVKQEYGKMSRRSELQSATAGRGINELRNKVLGKNEVFYGGQTFT
AVPARKSAKLITKERDRLSMLAGYDVSPFAHTANHTSKPKTAEPTKIPYA
ERGGPVSRLAGGVEASRKQRVQDLERLRLLKEENERFEKKKQAEGHVLGS
DNKKESEAGTPAVSMPTTPVPDKFKNRGFSFDASLTPKLSGSENFSFEIN
VGSRQAQNAKLKAAALLKKKPLEKINPNSTRGSESGKRRAIDELNEKFSS
SAKRQKIDEDDRELMRKSRIEKIMAATSSHTNLVEMREREAQEEYFNKLE
RKEAMEEKMLTTYKMPCKAVICQVCKYTAFSASDRCKEQKHPLKVVDAEK
RFFQCKDCGNRTTTVFKLPKQSCKNCKGSRWQRTAMIREKKILTGRETLS
VRGDEETFMGCLAGSANLNLLVPDEE*
BS24065.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mcm10-PA | 776 | CG9241-PA | 1..776 | 1..776 | 3970 | 100 | Plus |
