BS24109.complete Sequence
1526 bp assembled on 2011-02-03
GenBank Submission: KX803153
> BS24109.complete
GAAGTTATCAGTCGACATGGCCAATTTTGACGATACGTTGCAACGCGCCC
GCCTTGCCTTTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAG
CAGCTGGAGAATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCAT
CAGCGCCTTGGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCG
TGGAAACGGAATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTC
GACGAGTGGGTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGAT
GGACGACGTCCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCG
GCGCCTGGAACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCC
ATCGCCGCCGGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAA
CTGCGCCAAGTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATT
GCTATCCAGTTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAAC
CAGCGTTTCGACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGAT
TATCCACGCCGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGG
GTGGCAAAAGCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCG
GTCAAGCGCATCCTGTGGGGCAAGCTGATTAACTGCGGACAGACCTGCAT
CGCTCCGGACTACATCCTCTGCTCCAAGGAGGTGCAGGAGAAGTTCATCG
TGGAGGCCAAGGACGTGCTGAAGGAATGGTACGGCGAGAATATCCAGAGC
AGTCCGGATCTAAGCCGTGTGATCAACGCCAACAACTTCCAGCGCCTTCT
TGGCCTAATGAAGTCCGGCCGCGTGGCCGTCGGAGGTAACTACGATGCCA
GCGAGCGTTTCATCGAACCCACCATCTTGGTGGACGTGAAGGAGACCGAT
CCCATCATGGAGGAGGAGATCTTCGGCCCCATCTTGCCCATCTTCAATGT
GGAGAGTGCCTACGATGCCATCAAGTTCATCAATGCCAGAGAAAAGCCGC
TTGTAATTTACGTGTTCTCCAACTCGAATAAGCTAGTTAAGGAGTTCAGG
CGGAGCACCACCAGCGGCGGATTCTCCAGCAACGAAACCATAATGCACTG
TGGAGTTGATGTGCTGCCCTTCGGAGGCGTCGGCATGAGCGGCATGGGCA
GATATCATGGAAAGTACGGCTTCGAGACCTTCACGCACAAGAAATCTTGC
CTGGGCAAGGACTTATCCCCGTTGGGCGAGAAGTTGTCATCAGCTCGGTA
CCCACCCTACTCGGACCGCAAGGGATCGCTGCTCTCGTTCCTGCTGCGCA
AGCGCCGTCCGCTGCCCAACCTGCATCTGAGCCACGTGCTGGCCATCGGA
CTGGGAGTCGGATTGACGGTGCTGACCAACTACTACCTACAGAAAAGCTC
AACTGATTAAAAGCTTTCTAGACCAT
BS24109.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aldh-III-RE | 1494 | CG11140-PE | 1..1494 | 17..1510 | 7470 | 100 | Plus |
| Aldh-III-RU | 1506 | CG11140-PU | 1..1476 | 17..1492 | 7380 | 100 | Plus |
| Aldh-III-RQ | 1695 | CG11140-PQ | 199..1674 | 17..1492 | 7380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aldh-III-RE | 1840 | CG11140-RE | 193..1686 | 17..1510 | 7470 | 100 | Plus |
| Aldh-III-RU | 2115 | CG11140-RU | 193..1668 | 17..1492 | 7380 | 100 | Plus |
| Aldh-III-RQ | 2923 | CG11140-RQ | 1180..2655 | 17..1492 | 7380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7469614..7469847 | 892..659 | 1170 | 100 | Minus |
| 2R | 25286936 | 2R | 7470393..7470617 | 497..273 | 1125 | 100 | Minus |
| 2R | 25286936 | 2R | 7469360..7469557 | 1089..892 | 990 | 100 | Minus |
| 2R | 25286936 | 2R | 7470702..7470883 | 274..93 | 910 | 100 | Minus |
| 2R | 25286936 | 2R | 7469909..7470072 | 660..497 | 820 | 100 | Minus |
| 2R | 25286936 | 2R | 7467483..7467633 | 1492..1342 | 755 | 100 | Minus |
| 2R | 25286936 | 2R | 7467691..7467828 | 1341..1204 | 690 | 100 | Minus |
| 2R | 25286936 | 2R | 7468422..7468539 | 1205..1088 | 590 | 100 | Minus |
| 2R | 25286936 | 2R | 7473288..7473346 | 93..35 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:03:17 has no hits.
BS24109.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:27 Download gff for
BS24109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-III-RE | 191..1682 | 17..1508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:30 Download gff for
BS24109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-III-RE | 193..1684 | 17..1508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:18 Download gff for
BS24109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aldh-III-RE | 193..1684 | 17..1508 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:18 Download gff for
BS24109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7467691..7467826 | 1206..1341 | 100 | <- | Minus |
| 2R | 7468422..7468537 | 1090..1205 | 100 | <- | Minus |
| 2R | 7469360..7469557 | 892..1089 | 100 | <- | Minus |
| 2R | 7467035..7467050 | 1493..1508 | 100 | <- | Minus |
| 2R | 7467483..7467633 | 1342..1492 | 100 | <- | Minus |
| 2R | 7469615..7469845 | 661..891 | 100 | <- | Minus |
| 2R | 7469909..7470072 | 497..660 | 100 | <- | Minus |
| 2R | 7470394..7470615 | 275..496 | 100 | <- | Minus |
| 2R | 7470702..7470882 | 94..274 | 100 | <- | Minus |
| 2R | 7473288..7473346 | 35..93 | 100 | <- | Minus |
| 2R | 7473722..7473739 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:30 Download gff for
BS24109.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3358207..3358387 | 94..274 | 100 | <- | Minus |
| arm_2R | 3360793..3360851 | 35..93 | 100 | <- | Minus |
| arm_2R | 3361227..3361244 | 17..34 | 100 | | Minus |
| arm_2R | 3354540..3354555 | 1493..1508 | 100 | <- | Minus |
| arm_2R | 3354988..3355138 | 1342..1492 | 100 | <- | Minus |
| arm_2R | 3355196..3355331 | 1206..1341 | 100 | <- | Minus |
| arm_2R | 3355927..3356042 | 1090..1205 | 100 | <- | Minus |
| arm_2R | 3356865..3357062 | 892..1089 | 100 | <- | Minus |
| arm_2R | 3357120..3357350 | 661..891 | 100 | <- | Minus |
| arm_2R | 3357414..3357577 | 497..660 | 100 | <- | Minus |
| arm_2R | 3357899..3358120 | 275..496 | 100 | <- | Minus |
BS24109.pep Sequence
Translation from 16 to 1509
> BS24109.pep
MANFDDTLQRARLAFSSGKTRNVSFRRKQLENLLRCYEEHENEIISALEA
DLRRPKQESLIVETEFMKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQI
YNDPFGVVLVIGAWNYPLQLLLVPVASAIAAGNCVVIKPSEIAANCAKFI
ADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIFYTGSTRVGKIIHAAA
NKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYI
LCSKEVQEKFIVEAKDVLKEWYGENIQSSPDLSRVINANNFQRLLGLMKS
GRVAVGGNYDASERFIEPTILVDVKETDPIMEEEIFGPILPIFNVESAYD
AIKFINAREKPLVIYVFSNSNKLVKEFRRSTTSGGFSSNETIMHCGVDVL
PFGGVGMSGMGRYHGKYGFETFTHKKSCLGKDLSPLGEKLSSARYPPYSD
RKGSLLSFLLRKRRPLPNLHLSHVLAIGLGVGLTVLTNYYLQKSSTD*
BS24109.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aldh-III-PE | 497 | CG11140-PE | 1..497 | 1..497 | 2589 | 100 | Plus |
| Aldh-III-PU | 501 | CG11140-PU | 1..492 | 1..492 | 2565 | 100 | Plus |
| Aldh-III-PQ | 564 | CG11140-PQ | 67..558 | 1..492 | 2565 | 100 | Plus |
| Aldh-III-PS | 498 | CG11140-PS | 1..492 | 1..492 | 2565 | 100 | Plus |
| Aldh-III-PO | 563 | CG11140-PO | 66..557 | 1..492 | 2565 | 100 | Plus |
