BS24110.complete Sequence
917 bp assembled on 2011-03-18
GenBank Submission: KX801131
> BS24110.complete
GAAGTTATCAAACGACATGCAAAGTGTAACACGTTTGCTGAGCACAACGC
TGACTATACAAACGCCGTTTCGCACGGCGCCGGCGTTTCTGCAGCAATTG
CGCGGCAAAACCAAAGTGGTGGAGAAACCAAAACCTGGTGCCGGACAGCA
ATTCCGACGAACCGTGCACTTTCCGGAGAAGTACACCGTTGAGCCGCTGA
AGATCACCCATTTGGCTGGTCGGGATCCCGTCTCCGGTCGCTTGGTGGCC
AAGGGCATTGGCGGAGGCATCAAACAGCAGTATCGCTGGGTTAAATGGGT
GCGGGATGGTCCCACGGAGGGCGCCCAGGAGGAACTGGTACTCGAGGTGC
TACGCGATGGCTGTCGCACCGCCAAAGTGGCCCTGGTTGCCGTCGGCGAT
GAGCTGAAGTACATCCTGGCCACCGAGAACATGAAGGCTGGCGATATCCT
CAAGACCTCGCGCTTTATTCCTAGGATTCCGGTGCGTCCCAACGAAGGCG
ATGCCTATCCATTGGGCGCCTTGCCCGTGGGCACACGCATTCACTGTCTG
GAGAAGAACCCCGGCCAGATGTGCCACCTGATCCATGCCGCCGGCACCTT
CGGCACCATTCTGCGCAAGTTCGACGAAAAGGTGGTGGTGCAGCTGCCCT
CGAAGCGGGAGTTCGCCTTCCAGCGCACCTGCATGGCGACGGTTGGTCGC
CTGTCCAACCCGGAACACAACAAGGAGCATGTGGGCAGTGCCCAGCGGAT
GCGGGAGATGGGCAATCGACCACGTTCCGGTCTGTGGAAGCGCAAGGAAG
GCAAACACGGACGCAAGATACGCCGATTGCCGCCCATGACCACCATATCG
CCACCGGCTCCGCCCAAGGAGGAGGCCATCAAGTTGACGCTGCCCCTGTG
AAAGCTTTCTAGACCAT
BS24110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL2-RA | 885 | CG7636-PA | 1..885 | 17..901 | 4425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL2-RA | 1039 | CG7636-RA | 95..979 | 17..901 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:35:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11120941..11121406 | 17..482 | 2330 | 100 | Plus |
| 3L | 28110227 | 3L | 11121562..11121981 | 482..901 | 2100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:35:54 has no hits.
BS24110.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-18 12:09:30 Download gff for
BS24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 83..966 | 17..900 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:18 Download gff for
BS24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 95..978 | 17..900 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:22 Download gff for
BS24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL2-RA | 95..978 | 17..900 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:22 Download gff for
BS24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11120941..11121406 | 17..482 | 100 | -> | Plus |
| 3L | 11121563..11121980 | 483..900 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:18 Download gff for
BS24110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11114041..11114506 | 17..482 | 100 | -> | Plus |
| arm_3L | 11114663..11115080 | 483..900 | 100 | | Plus |
BS24110.pep Sequence
Translation from 16 to 900
> BS24110.pep
MQSVTRLLSTTLTIQTPFRTAPAFLQQLRGKTKVVEKPKPGAGQQFRRTV
HFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKWVRDGPT
EGAQEELVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRF
IPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILR
KFDEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGN
RPRSGLWKRKEGKHGRKIRRLPPMTTISPPAPPKEEAIKLTLPL*
BS24110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:07:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL2-PA | 294 | CG7636-PA | 1..294 | 1..294 | 1541 | 100 | Plus |
