BS24112.complete Sequence
557 bp assembled on 2011-01-28
GenBank Submission: KX803638
> BS24112.complete
GAAGTTATCAGTCGACATGGCTCCCCAGCAAAAGGGTAAACAAGGCACGA
AGGGCGCCAAGCAAATCGTGGAGGAAAACAAGACTACACTGACTTTCTAC
CGGAACATGGCCATTGGATGTGCTGCACCTGCTCTGCTCCTCAGTTTCCT
GGTCTTCGAAGTCACCAAAACCTCAGTGTTTATGCACATTCTTTCGTTGC
TGATCCTGGGGAGCTCCTACCAGTTTATGGCGTTCATGTCGCAGGCCAAA
TACTCTGAGAGCGGTGCTCTTTTGGACTCCGGCAACGACTTAAATATGGA
AGGCGGCATCGCGGAAAACGTTAAGGATTTGATCATCCTTACTTCCGGCA
CCCTGCTGCTGGCCCTCATCTCAAACTACTTCTGGTTGGTGCTGCTTTTG
GCGCCCATACGAGCTGGATGGATGCTCTGGGGCTCCGTCATCCAGCCGTG
GCTGTCGCAACGCAACGCCCAGGACGATAATCCCCAGGTGGACGAGAAAA
AGCAAAAAAAGATGGATCGCAGAATGCGTCGCATGAGATAGAAGCTTTCT
AGACCAT
BS24112.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8320-RA | 525 | CG8320-PA | 1..525 | 17..541 | 2610 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8320-RA | 981 | CG8320-RA | 161..690 | 16..545 | 2635 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15993187..15993416 | 316..545 | 1150 | 100 | Plus |
2R | 25286936 | 2R | 15992778..15992933 | 23..178 | 765 | 99.4 | Plus |
2R | 25286936 | 2R | 15992992..15993129 | 178..315 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:36:24 has no hits.
BS24112.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:06 Download gff for
BS24112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8320-RA | 160..684 | 17..541 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:04 Download gff for
BS24112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8320-RA | 162..686 | 17..541 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:04 Download gff for
BS24112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8320-RA | 162..686 | 17..541 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:04 Download gff for
BS24112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15992776..15992933 | 17..178 | 96 | -> | Plus |
2R | 15992993..15993129 | 179..315 | 100 | -> | Plus |
2R | 15993187..15993412 | 316..541 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:04 Download gff for
BS24112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11880281..11880438 | 17..178 | 96 | -> | Plus |
arm_2R | 11880498..11880634 | 179..315 | 100 | -> | Plus |
arm_2R | 11880692..11880917 | 316..541 | 100 | | Plus |
BS24112.pep Sequence
Translation from 16 to 540
> BS24112.pep
MAPQQKGKQGTKGAKQIVEENKTTLTFYRNMAIGCAAPALLLSFLVFEVT
KTSVFMHILSLLILGSSYQFMAFMSQAKYSESGALLDSGNDLNMEGGIAE
NVKDLIILTSGTLLLALISNYFWLVLLLAPIRAGWMLWGSVIQPWLSQRN
AQDDNPQVDEKKQKKMDRRMRRMR*
BS24112.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8320-PA | 174 | CG8320-PA | 1..174 | 1..174 | 884 | 100 | Plus |