BS24113.complete Sequence
422 bp assembled on 2011-01-28
GenBank Submission: KX803776
> BS24113.complete
GAAGTTATCAGTCGACATGCTTCTGCGGATGACCCAGTTTCTCTGCCTTG
CGGCACTCGTTTTGCTAAGTCTTATGCAACTTACGCAGGCAGTAGCCACT
CCCAATAATAATAATAATAATAATAACAATATTAAACCGAAGGCTGTGGT
TCAGGTGCAACCTGGAAATCCATCGGGAAACAAGCCTGCAGTTGCCACAA
CTACAATCAAACCACAGAGACTGGTACCAGATCCCAAATGCCTGCAGCCC
TTGGACGTTGGTCCATGCCGCATGAGCCTAGAAAGGTTCTACTACAACAA
GGATTCAAAAGCTTGCGAGACCTTCAAGTACGGAGGATGTCGAGGCAATG
ACAATCGTTGGGGATTCCGACAAACTTGTGAGGAGGCTTGTATTCCCAAA
AAGTGAAAGCTTTCTAGACCAT
BS24113.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:38:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10031-RA | 390 | CG10031-PA | 1..390 | 17..406 | 1950 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10031-RA | 577 | CG10031-RA | 53..442 | 17..406 | 1950 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3698827..3699040 | 230..17 | 1070 | 100 | Minus |
2L | 23513712 | 2L | 3698586..3698763 | 406..229 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:38:14 has no hits.
BS24113.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:08 Download gff for
BS24113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 52..440 | 17..405 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:49 Download gff for
BS24113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 53..441 | 17..405 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:44 Download gff for
BS24113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10031-RA | 53..441 | 17..405 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:44 Download gff for
BS24113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3698587..3698761 | 231..405 | 100 | <- | Minus |
2L | 3698827..3699040 | 17..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:49 Download gff for
BS24113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3698587..3698761 | 231..405 | 100 | <- | Minus |
arm_2L | 3698827..3699040 | 17..230 | 100 | | Minus |
BS24113.pep Sequence
Translation from 16 to 405
> BS24113.pep
MLLRMTQFLCLAALVLLSLMQLTQAVATPNNNNNNNNNIKPKAVVQVQPG
NPSGNKPAVATTTIKPQRLVPDPKCLQPLDVGPCRMSLERFYYNKDSKAC
ETFKYGGCRGNDNRWGFRQTCEEACIPKK*
BS24113.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10031-PA | 129 | CG10031-PA | 1..129 | 1..129 | 699 | 100 | Plus |
CG3604-PB | 132 | CG3604-PB | 36..108 | 56..128 | 155 | 39.7 | Plus |
CG3604-PA | 132 | CG3604-PA | 36..108 | 56..128 | 155 | 39.7 | Plus |