BS24114.complete Sequence
770 bp assembled on 2011-01-28
GenBank Submission: KX804497
> BS24114.complete
GAAGTTATCAGTCGACATGGGCTCGAACACTGGAGCTTGGATTCTACTGG
GCCTGCTGGCCGGCATCGCCTCTCTGTCTAGCGCTGCGAATATACAGCGA
AATGAGGACCAGACGATTCTTCAGAACAATGGAAACACCTTCCTATCAAA
CGGAGCCGGGCAAATCATTCGTGGACCCGATGGCAAAACAGTATTGATCG
GATCCGATGGGCGCAGGATCATCACGGATGCCGACTCCAGCGAAGAGGAC
AGCTCGCACGATTATGGTCACGGTGGGAGCTATAACAATGTTATCATCAA
TGGTGGCTCGGGATCCAGCGTAATTCATGGCGATGGACATAGCTTCATTG
TTGGAGATGCGAGTCATGGAAGTTACATGAACAGCAATGGACGCAGTATT
AGGATCATAAATGGTGCCATCGAACTCAATGATCACGGCCAGGTGTACAC
ATTCAGGCCAAAAGCAGCAGGCATTAACGAAAAGGAAACCGTCACCATCA
ACGGACAACCGGCTCAGGTGGAGTACTCCAATGGTGATATAGTCATCGAA
CTGGCCGATCATACGGTGATTGCCAAGATAGGTGGACGCACATTTCTGGG
CGATCGCGAATCCTTCGACAATCGGGATAAATTAGAGGCGGAGGCAAAGA
ACTATGCCGATCGTATCCAGCAAGAGGTGCACGCCAATCTCCAGAAAACC
ATGGCTGATATTCAAAGGGATCTTCAGAATTCCCTGGGAAATATTTTCTA
TTAGAAGCTTTCTAGACCAT
BS24114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18067-RB | 738 | CG18067-PB | 1..738 | 17..754 | 3690 | 100 | Plus |
| CG18067-RA | 738 | CG18067-PA | 1..738 | 17..754 | 3690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18067-RB | 1530 | CG18067-RB | 282..1023 | 17..758 | 3710 | 100 | Plus |
| CG18067-RA | 808 | CG18067-RA | 18..759 | 17..758 | 3710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20534653..20535328 | 83..758 | 3380 | 100 | Plus |
| 2R | 25286936 | 2R | 20534526..20534592 | 17..83 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:38:38 has no hits.
BS24114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:09 Download gff for
BS24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 17..754 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:00 Download gff for
BS24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 15..752 | 17..754 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:55 Download gff for
BS24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 18..755 | 17..754 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:55 Download gff for
BS24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20534526..20534592 | 17..83 | 100 | -> | Plus |
| 2R | 20534654..20535324 | 84..754 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:00 Download gff for
BS24114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16422031..16422097 | 17..83 | 100 | -> | Plus |
| arm_2R | 16422159..16422829 | 84..754 | 100 | | Plus |
BS24114.pep Sequence
Translation from 16 to 753
> BS24114.pep
MGSNTGAWILLGLLAGIASLSSAANIQRNEDQTILQNNGNTFLSNGAGQI
IRGPDGKTVLIGSDGRRIITDADSSEEDSSHDYGHGGSYNNVIINGGSGS
SVIHGDGHSFIVGDASHGSYMNSNGRSIRIINGAIELNDHGQVYTFRPKA
AGINEKETVTINGQPAQVEYSNGDIVIELADHTVIAKIGGRTFLGDRESF
DNRDKLEAEAKNYADRIQQEVHANLQKTMADIQRDLQNSLGNIFY*
BS24114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:55:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18067-PB | 245 | CG18067-PB | 1..245 | 1..245 | 1260 | 100 | Plus |
| CG18067-PA | 245 | CG18067-PA | 1..245 | 1..245 | 1260 | 100 | Plus |
