BS24120.complete Sequence
518 bp assembled on 2011-01-28
GenBank Submission: KX804205
> BS24120.complete
GAAGTTATCAGTCGACATGCGAGTTTTCCTGCTATATTCCATATATTTGC
TGCTGGTGCTGTCGCCTTCATTGGTTCAAGGCCAAGGTCATGTGCTGGAT
AAGCCGGTAACGGAGCTGTGTCTCACCTGCATTTGTGAGGCCATTAGTGG
TTGCAATGCCACGGCGATTTGCACCAGTGCGGAAAAGGGAGCATGCGGCA
TATTCCGCATCACCTGGGGATACTGGGTGGATGCTGGCAAACTGACGGTA
AATGGAGAGCATCCCGATTCGGAAAAGGCTTTCATCAACTGCGCCAAGGA
TCCGCACTGTGCCGCCGATTTGGTGCAAAACTATATGAAGAAGTTCAATC
AGGATTGCAATGATGATGGTGAGATGGATTGCCACGATTATGCTCGAATC
CATAAACTGGGGGCTTATGGCTGCCAAGCGGACATGCCCTACAATTTCCA
GAGTGTGTTCGAGGAGTGCATCGAGAGGTACGAGGATGAGGGATTTGAGT
AAAAGCTTTCTAGACCAT
BS24120.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:39:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6421-RA | 486 | CG6421-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:39:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6421-RA | 600 | CG6421-RA | 57..543 | 17..503 | 2435 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:39:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16872431..16872849 | 85..503 | 2095 | 100 | Plus |
| 2R | 25286936 | 2R | 16872306..16872377 | 17..88 | 360 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1268..1320 | 5..57 | 121 | 69.8 | Plus |
BS24120.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:10 Download gff for
BS24120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6421-RA | 57..540 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:20 Download gff for
BS24120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6421-RA | 57..540 | 17..500 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:13 Download gff for
BS24120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6421-RA | 57..540 | 17..500 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:13 Download gff for
BS24120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16872306..16872375 | 17..86 | 100 | -> | Plus |
| 2R | 16872433..16872846 | 87..500 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:20 Download gff for
BS24120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12759811..12759880 | 17..86 | 100 | -> | Plus |
| arm_2R | 12759938..12760351 | 87..500 | 100 | | Plus |
BS24120.pep Sequence
Translation from 16 to 501
> BS24120.pep
MRVFLLYSIYLLLVLSPSLVQGQGHVLDKPVTELCLTCICEAISGCNATA
ICTSAEKGACGIFRITWGYWVDAGKLTVNGEHPDSEKAFINCAKDPHCAA
DLVQNYMKKFNQDCNDDGEMDCHDYARIHKLGAYGCQADMPYNFQSVFEE
CIERYEDEGFE*
BS24120.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6421-PA | 161 | CG6421-PA | 1..161 | 1..161 | 893 | 100 | Plus |
| CG6429-PA | 159 | CG6429-PA | 24..146 | 27..152 | 454 | 57.1 | Plus |
| CG6426-PA | 161 | CG6426-PA | 15..153 | 11..156 | 448 | 52.7 | Plus |
| CG6435-PA | 163 | CG6435-PA | 4..147 | 5..156 | 424 | 53.3 | Plus |
| CG14823-PA | 263 | CG14823-PA | 138..258 | 35..153 | 168 | 32.5 | Plus |
