BS24125.complete Sequence
593 bp assembled on 2011-01-28
GenBank Submission: KX800322
> BS24125.complete
GAAGTTATCAGTCGACATGGCGGGCCCACTTTTGTGGCAAAACTTCAAGG
TGTTCGTCACCCGCTACCCGATTATGCGCGGCATGATATCGTACAGCCTG
ATCTGGCCCACGGGCAGCCTCATCCAGCAAACGGTTGAGGGCAGGCGCTG
GGGCACCTACGACTGGTGGCGCGTGCTCCGGTTCAGCATGTACGGTGGTC
TGTTTGTTGCTCCTACCCTCTACGGATGGGTCAAGATTTCCAGCGCCATG
TGGCCGCAGACATCGTTGAGGACGGGCGTCATTAAGGCGGCGGTGGAGAC
GATCTCGTACACCCCCGGCGCGATGACCTGCTTCTACTTTATCATGAGCC
TCCTGGAGTCCAAGACGGTGGAGCAGGCGGTAGCCGAGGTCGGCAAGAAA
TTCCTGCCCACGTACAAGGTGGCTCTGTCCGTATGGCCACTGGTGGCCAC
CATCAACTTCACCCTGATCCCCGAGCGCAACCGGGTGCCATTCATCAGCG
CGTGCAGCCTGTGCTGGACCTGCTTCTTGGCCTACATGAAGCACCTGGAG
CACCACGAGGTGGACGGGGCCATTTGAAAGCTTTCTAGACCAT
BS24125.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:41:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14778-RA | 561 | CG14778-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14778-RA | 753 | CG14778-RA | 139..699 | 17..577 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1470155..1470341 | 234..420 | 935 | 100 | Plus |
| X | 23542271 | X | 1470400..1470560 | 417..577 | 805 | 100 | Plus |
| X | 23542271 | X | 1469818..1469954 | 17..153 | 685 | 100 | Plus |
| X | 23542271 | X | 1470014..1470097 | 152..235 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:41:02 has no hits.
BS24125.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:12 Download gff for
BS24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 139..698 | 17..576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:04 Download gff for
BS24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 139..698 | 17..576 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:58 Download gff for
BS24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14778-RA | 139..698 | 17..576 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:58 Download gff for
BS24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1469818..1469953 | 17..152 | 100 | -> | Plus |
| X | 1470015..1470097 | 153..235 | 100 | -> | Plus |
| X | 1470157..1470339 | 236..418 | 100 | -> | Plus |
| X | 1470402..1470559 | 419..576 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:04 Download gff for
BS24125.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1363851..1363986 | 17..152 | 100 | -> | Plus |
| arm_X | 1364048..1364130 | 153..235 | 100 | -> | Plus |
| arm_X | 1364190..1364372 | 236..418 | 100 | -> | Plus |
| arm_X | 1364435..1364592 | 419..576 | 100 | | Plus |
BS24125.pep Sequence
Translation from 16 to 576
> BS24125.pep
MAGPLLWQNFKVFVTRYPIMRGMISYSLIWPTGSLIQQTVEGRRWGTYDW
WRVLRFSMYGGLFVAPTLYGWVKISSAMWPQTSLRTGVIKAAVETISYTP
GAMTCFYFIMSLLESKTVEQAVAEVGKKFLPTYKVALSVWPLVATINFTL
IPERNRVPFISACSLCWTCFLAYMKHLEHHEVDGAI*
BS24125.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14778-PA | 186 | CG14778-PA | 1..186 | 1..186 | 1003 | 100 | Plus |
| CG14777-PF | 196 | CG14777-PF | 23..185 | 17..181 | 544 | 58.8 | Plus |
| CG14777-PC | 196 | CG14777-PC | 23..185 | 17..181 | 544 | 58.8 | Plus |
| CG14777-PE | 196 | CG14777-PE | 23..185 | 17..181 | 544 | 58.8 | Plus |
| CG14777-PD | 196 | CG14777-PD | 23..185 | 17..181 | 544 | 58.8 | Plus |
