BS24126.complete Sequence
398 bp assembled on 2011-01-28
GenBank Submission: KX803809
> BS24126.complete
GAAGTTATCAGTCGACATGCTTTTCGATGGCGCAACCGGCAATGGGCACG
GTCAGGGCCAGAATACCCTGAATCCATTGGGGCCAGGCCAGGAGGAGCCC
GCCCTATGCGAGCAGTACTATCTGCTGGGCGATGGTTCCATCATTCTGCG
CAACCATTCCATCGACTTGTCGAATCCGCCCCTGAAATCGCGCTGCTGCC
AGCTCCCAACACTCATCCACGACATATGCGTCAACTGCGTGATGGATCTC
TGCGAGGAGTGTGGCTACTCCTGCGGCGAGTGCGCCAAGTTTATTTGCCG
CAACTGCGTGACTTTATTTGGTAATCGAATTGAAGAAGAGGAGGCTCCGC
TGTGCGAGCACTGCCAGATGTTCCTCAGCTAGAAGCTTTCTAGACCAT
BS24126.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:41:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32817-RB | 366 | CG32817-PB | 1..366 | 17..382 | 1830 | 100 | Plus |
CG32817-RC | 366 | CG32817-PC | 1..366 | 17..382 | 1830 | 100 | Plus |
CG32817-RA | 366 | CG32817-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32817-RB | 580 | CG32817-RB | 142..507 | 17..382 | 1830 | 100 | Plus |
CG32817-RC | 837 | CG32817-RC | 399..764 | 17..382 | 1830 | 100 | Plus |
CG32817-RA | 532 | CG32817-RA | 94..459 | 17..382 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 479644..479945 | 17..318 | 1510 | 100 | Plus |
X | 23542271 | X | 482132..482433 | 17..318 | 1480 | 99.3 | Plus |
X | 23542271 | X | 477621..477931 | 17..318 | 1040 | 89.7 | Plus |
X | 23542271 | X | 480030..480093 | 319..382 | 320 | 100 | Plus |
X | 23542271 | X | 482518..482581 | 319..382 | 305 | 98.4 | Plus |
X | 23542271 | X | 478013..478075 | 319..381 | 240 | 92.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:41:15 has no hits.
BS24126.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:13 Download gff for
BS24126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32817-RB | 127..492 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:09 Download gff for
BS24126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32817-RA | 94..459 | 17..382 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:06 Download gff for
BS24126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32817-RA | 94..459 | 17..382 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:06 Download gff for
BS24126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 479644..479945 | 17..318 | 100 | -> | Plus |
X | 480030..480093 | 319..382 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:09 Download gff for
BS24126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 373677..373978 | 17..318 | 100 | -> | Plus |
arm_X | 374063..374126 | 319..382 | 100 | | Plus |
BS24126.pep Sequence
Translation from 16 to 381
> BS24126.pep
MLFDGATGNGHGQGQNTLNPLGPGQEEPALCEQYYLLGDGSIILRNHSID
LSNPPLKSRCCQLPTLIHDICVNCVMDLCEECGYSCGECAKFICRNCVTL
FGNRIEEEEAPLCEHCQMFLS*
BS24126.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32817-PB | 121 | CG32817-PB | 1..121 | 1..121 | 683 | 100 | Plus |
CG32817-PC | 121 | CG32817-PC | 1..121 | 1..121 | 683 | 100 | Plus |
CG32817-PA | 121 | CG32817-PA | 1..121 | 1..121 | 683 | 100 | Plus |
CG3176-PD | 121 | CG3176-PD | 1..121 | 1..121 | 664 | 97.5 | Plus |
CG3176-PA | 121 | CG3176-PA | 1..121 | 1..121 | 664 | 97.5 | Plus |