BS24130.complete Sequence
815 bp assembled on 2011-01-28
GenBank Submission: KX803625
> BS24130.complete
GAAGTTATCAGTCGACATGGAGCAACCAGCAACTGGAGGCGCCGCTGTCC
AACCGGGCGTGTCCCCAGCGCACATCCACGACACGGATCAGCTCCTGGAC
CCCGTCCTCTTCTCCAACGACAATGGAAGCTACAAGCTAAATACAGTGCC
CGCATTTAGCCTTCATCTGGTTATCTCCACTGCAATCTCCATTGTGGGGA
TCGTACTTGCAGCCTCGTTTCCAACCGATCGGCGCTGCGATGCATACTTT
ATAATGCTCTACCTACGGGCCACCTTCTGGGTCATCACATATCTCTTCGA
TCACTTCGTAAAGAAGCAACACGACAATCTACGCATGCAGGGCTATCACG
ACTTTCACCGCGAGACTAACATGCAGAAGGGGATTCCCCTTCAGCTGGTA
TCCCTGTGGAACTCCATGCTGCTTGCTGTCCAGGCCCTAATCCACCACTT
CTATGCGGAGAACTTTTGGGAACATTGCGCCGCCGGGTGGCTGTCGCCGG
TCAGCTATGTGACCGCCTTCACCGTGGCCGAGAATCTGGTGCTGGCCGTT
TCCCACAGCTTATATATTGACAAGGTGCGTAAGTTCAACAGCGCCAAGCT
GGCTCCGGATGTTTTGCGTGGTGCGGACCGCGCCGGCGGTTCCCTGGGCC
TCATGCAACCAGGAGGCGACACAGAAGAGCTTCTGGAGAAGCAGGCCGAC
CTTATCGCCTATCTGCGTGACCATACACACAAGCTCAACCAGAAACTGCA
TCAAATGCAGACCAACGTGCGACCAGTGAGGGCACCACAAATTCCTTAAA
AGCTTTCTAGACCAT
BS24130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7523-RA | 783 | CG7523-PA | 1..783 | 17..799 | 3915 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7523-RA | 1134 | CG7523-RA | 99..882 | 17..800 | 3920 | 100 | Plus |
CG14322-RE | 5857 | CG14322-RE | 5268..5499 | 800..569 | 1160 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17670066..17670342 | 569..293 | 1385 | 100 | Minus |
3R | 32079331 | 3R | 17669396..17669627 | 800..569 | 1160 | 100 | Minus |
3R | 32079331 | 3R | 17670655..17670797 | 159..17 | 715 | 100 | Minus |
3R | 32079331 | 3R | 17670405..17670540 | 292..157 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:42:57 has no hits.
BS24130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:15 Download gff for
BS24130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7523-RA | 98..878 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:51 Download gff for
BS24130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7523-RA | 99..879 | 17..797 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:44 Download gff for
BS24130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7523-RA | 99..879 | 17..797 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:44 Download gff for
BS24130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17670405..17670537 | 160..292 | 100 | <- | Minus |
3R | 17670655..17670797 | 17..159 | 100 | | Minus |
3R | 17670066..17670342 | 293..569 | 100 | <- | Minus |
3R | 17669399..17669626 | 570..797 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:51 Download gff for
BS24130.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13495121..13495348 | 570..797 | 100 | <- | Minus |
arm_3R | 13495788..13496064 | 293..569 | 100 | <- | Minus |
arm_3R | 13496127..13496259 | 160..292 | 100 | <- | Minus |
arm_3R | 13496377..13496519 | 17..159 | 100 | | Minus |
BS24130.pep Sequence
Translation from 16 to 798
> BS24130.pep
MEQPATGGAAVQPGVSPAHIHDTDQLLDPVLFSNDNGSYKLNTVPAFSLH
LVISTAISIVGIVLAASFPTDRRCDAYFIMLYLRATFWVITYLFDHFVKK
QHDNLRMQGYHDFHRETNMQKGIPLQLVSLWNSMLLAVQALIHHFYAENF
WEHCAAGWLSPVSYVTAFTVAENLVLAVSHSLYIDKVRKFNSAKLAPDVL
RGADRAGGSLGLMQPGGDTEELLEKQADLIAYLRDHTHKLNQKLHQMQTN
VRPVRAPQIP*
BS24130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7523-PA | 260 | CG7523-PA | 1..260 | 1..260 | 1367 | 100 | Plus |