Clone BS24130 Report

Search the DGRC for BS24130

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:241
Well:30
Vector:pDNR-Dual
Associated Gene/TranscriptCG7523-RA
Protein status:BS24130.pep: gold
Sequenced Size:815

Clone Sequence Records

BS24130.complete Sequence

815 bp assembled on 2011-01-28

GenBank Submission: KX803625

> BS24130.complete
GAAGTTATCAGTCGACATGGAGCAACCAGCAACTGGAGGCGCCGCTGTCC
AACCGGGCGTGTCCCCAGCGCACATCCACGACACGGATCAGCTCCTGGAC
CCCGTCCTCTTCTCCAACGACAATGGAAGCTACAAGCTAAATACAGTGCC
CGCATTTAGCCTTCATCTGGTTATCTCCACTGCAATCTCCATTGTGGGGA
TCGTACTTGCAGCCTCGTTTCCAACCGATCGGCGCTGCGATGCATACTTT
ATAATGCTCTACCTACGGGCCACCTTCTGGGTCATCACATATCTCTTCGA
TCACTTCGTAAAGAAGCAACACGACAATCTACGCATGCAGGGCTATCACG
ACTTTCACCGCGAGACTAACATGCAGAAGGGGATTCCCCTTCAGCTGGTA
TCCCTGTGGAACTCCATGCTGCTTGCTGTCCAGGCCCTAATCCACCACTT
CTATGCGGAGAACTTTTGGGAACATTGCGCCGCCGGGTGGCTGTCGCCGG
TCAGCTATGTGACCGCCTTCACCGTGGCCGAGAATCTGGTGCTGGCCGTT
TCCCACAGCTTATATATTGACAAGGTGCGTAAGTTCAACAGCGCCAAGCT
GGCTCCGGATGTTTTGCGTGGTGCGGACCGCGCCGGCGGTTCCCTGGGCC
TCATGCAACCAGGAGGCGACACAGAAGAGCTTCTGGAGAAGCAGGCCGAC
CTTATCGCCTATCTGCGTGACCATACACACAAGCTCAACCAGAAACTGCA
TCAAATGCAGACCAACGTGCGACCAGTGAGGGCACCACAAATTCCTTAAA
AGCTTTCTAGACCAT

BS24130.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7523-RA 783 CG7523-PA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7523-RA 1134 CG7523-RA 99..882 17..800 3920 100 Plus
CG14322-RE 5857 CG14322-RE 5268..5499 800..569 1160 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:56
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17670066..17670342 569..293 1385 100 Minus
3R 32079331 3R 17669396..17669627 800..569 1160 100 Minus
3R 32079331 3R 17670655..17670797 159..17 715 100 Minus
3R 32079331 3R 17670405..17670540 292..157 680 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:42:57 has no hits.

BS24130.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:15 Download gff for BS24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG7523-RA 98..878 17..797 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:07:51 Download gff for BS24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG7523-RA 99..879 17..797 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:25:44 Download gff for BS24130.complete
Subject Subject Range Query Range Percent Splice Strand
CG7523-RA 99..879 17..797 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:25:44 Download gff for BS24130.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17670405..17670537 160..292 100 <- Minus
3R 17670655..17670797 17..159 100   Minus
3R 17670066..17670342 293..569 100 <- Minus
3R 17669399..17669626 570..797 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:07:51 Download gff for BS24130.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13495121..13495348 570..797 100 <- Minus
arm_3R 13495788..13496064 293..569 100 <- Minus
arm_3R 13496127..13496259 160..292 100 <- Minus
arm_3R 13496377..13496519 17..159 100   Minus

BS24130.pep Sequence

Translation from 16 to 798

> BS24130.pep
MEQPATGGAAVQPGVSPAHIHDTDQLLDPVLFSNDNGSYKLNTVPAFSLH
LVISTAISIVGIVLAASFPTDRRCDAYFIMLYLRATFWVITYLFDHFVKK
QHDNLRMQGYHDFHRETNMQKGIPLQLVSLWNSMLLAVQALIHHFYAENF
WEHCAAGWLSPVSYVTAFTVAENLVLAVSHSLYIDKVRKFNSAKLAPDVL
RGADRAGGSLGLMQPGGDTEELLEKQADLIAYLRDHTHKLNQKLHQMQTN
VRPVRAPQIP*

BS24130.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG7523-PA 260 CG7523-PA 1..260 1..260 1367 100 Plus