BS24134.complete Sequence
575 bp assembled on 2011-01-28
GenBank Submission: KX800890
> BS24134.complete
GAAGTTATCAGTCGACATGTCGCTGGTGGCAGATTATAGCGACTCCTCCG
AATCCGATGAAGACAGCAGTGGCCAATTTTCCGAAGACGGGGAAACAAAG
AGTGCGGCACCAGCCAAAAATGAGAAGACTCCTCCTCCCAAGTTGCCCAG
TGCTAGCCAAGCTTTTTCCCAAGGAGCTGGAAAGGGAGATGTGTTTAACA
ATCCCTTCCTGGAGGCCGAGCTGCATAAAACCGCGTCGCTGGAGCGGCAC
GTGAAGATGGTCGACAACGACGCGCACCAAAAGTTGAAGAATGGCCGTAA
GATTTGCTGGAACTTTAGAAGGGGACGCTGCCGCTTTGGCACCAGTTGCC
AGTATGCTCACGATTCCGACTTGTCGGTGGATGAGGCGGCGGAGAAGAGT
GCATTACCGGATCAATCAGTGCCTGTGGTCGTAGAAGCTGCACCGGGTAA
TTTCAACAGGCGTAAGCGCCCGGGTCTGGGCGATGCTCTGGAGCCGGGCA
AACGGGTTATGAAGTCCTACAAACAGCAAAATCCGCAAAATCCATTTGCC
CGGCGTTAGAAGCTTTCTAGACCAT
BS24134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-RA | 543 | CG42382-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-RA | 885 | CG42382-RA | 46..589 | 17..560 | 2720 | 100 | Plus |
| Rad51C-RB | 1918 | CG2412-RB | 1110..1569 | 560..101 | 2300 | 100 | Minus |
| Rad51C-RB | 1918 | CG2412-RB | 1626..1711 | 102..17 | 430 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:40:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9166862..9167321 | 560..101 | 2300 | 100 | Minus |
| 2R | 25286936 | 2R | 9167378..9167463 | 102..17 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:40:12 has no hits.
BS24134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:11 Download gff for
BS24134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 56..598 | 17..559 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:06:45 Download gff for
BS24134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 46..588 | 17..559 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:24:37 Download gff for
BS24134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 46..588 | 17..559 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:24:37 Download gff for
BS24134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9166863..9167319 | 103..559 | 100 | <- | Minus |
| 2R | 9167378..9167463 | 17..102 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:06:45 Download gff for
BS24134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5054368..5054824 | 103..559 | 100 | <- | Minus |
| arm_2R | 5054883..5054968 | 17..102 | 100 | | Minus |
BS24134.pep Sequence
Translation from 16 to 558
> BS24134.pep
MSLVADYSDSSESDEDSSGQFSEDGETKSAAPAKNEKTPPPKLPSASQAF
SQGAGKGDVFNNPFLEAELHKTASLERHVKMVDNDAHQKLKNGRKICWNF
RRGRCRFGTSCQYAHDSDLSVDEAAEKSALPDQSVPVVVEAAPGNFNRRK
RPGLGDALEPGKRVMKSYKQQNPQNPFARR*
BS24134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-PA | 180 | CG8016-PA | 1..180 | 1..180 | 947 | 100 | Plus |
