BS24139.complete Sequence
602 bp assembled on 2011-01-28
GenBank Submission: KX805109
> BS24139.complete
GAAGTTATCAGTCGACATGGCCGGGGAATATATCATACTGGAGAACTCGT
CGACTTATCCGGGCTTCCATTCCAGTTCCAACGGATTGGCGAATGGCATG
TACCGCTCCGCCCAGCGCATCTCCACCGATCGCCTGGTCCTGCTCATTCT
GCTGGTGAGCACCACGGTGATCGGGCTGTTTGCCTACTGGGATGTAATGG
TGCTCAACGCCGGCGCACTGCCACTGTCCAGAGGCACTAGCTCTGTTGAT
TACATGGAGCCTGGACTGCGCAACGAAACCCTGGCCGAGAAGATGCATCG
GGAGGTGAGAGTCCTGTGCTGGGTGCTCACCACACCCAAATACCACAAGA
CCCGGGCCATTCACGTTTTGCGAACGTGGGGCAAACGCTGCAATAAGATC
TACTTCATGACCTCTGAGCCGGATGACGAGCTGCCCACCGTTGTGCTGAC
CAAGCCGGACCGATACGAGATGCTGTGGGGCAAGACCAAAGAGGCCTTTG
TCCACATCCACGAGCAGATGCGCCACGAGGCGGATTGGTTCATAAAGGCG
GACGACGACACGTATGTGAAAGATTCAGATTCTTAAAAGCTTTCTAGACC
AT
BS24139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-RE | 1122 | CG7440-PE | 1..545 | 17..561 | 2725 | 100 | Plus |
| tgy-RC | 1122 | CG7440-PC | 1..545 | 17..561 | 2725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-RE | 1590 | CG7440-RE | 13..557 | 17..561 | 2725 | 100 | Plus |
| tgy-RC | 1319 | CG7440-RC | 13..557 | 17..561 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19126734..19127304 | 587..17 | 2855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:44:21 has no hits.
BS24139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:18 Download gff for
BS24139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 10..577 | 17..584 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:30 Download gff for
BS24139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 10..577 | 17..584 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:15 Download gff for
BS24139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RC | 13..560 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:15 Download gff for
BS24139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19126737..19127304 | 17..584 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:30 Download gff for
BS24139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19020770..19021337 | 17..584 | 100 | | Minus |
BS24139.pep Sequence
Translation from 16 to 585
> BS24139.pep
MAGEYIILENSSTYPGFHSSSNGLANGMYRSAQRISTDRLVLLILLVSTT
VIGLFAYWDVMVLNAGALPLSRGTSSVDYMEPGLRNETLAEKMHREVRVL
CWVLTTPKYHKTRAIHVLRTWGKRCNKIYFMTSEPDDELPTVVLTKPDRY
EMLWGKTKEAFVHIHEQMRHEADWFIKADDDTYVKDSDS*
BS24139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-PE | 373 | CG7440-PE | 1..184 | 1..184 | 974 | 99.5 | Plus |
| tgy-PC | 373 | CG7440-PC | 1..184 | 1..184 | 974 | 99.5 | Plus |
| C1GalTA-PA | 388 | CG9520-PA | 88..185 | 86..183 | 321 | 57.1 | Plus |
| C1GalTA-PC | 388 | CG9520-PC | 88..185 | 86..183 | 321 | 57.1 | Plus |
| C1GalTA-PB | 388 | CG9520-PB | 88..185 | 86..183 | 321 | 57.1 | Plus |
