Clone BS24150 Report

Search the DGRC for BS24150

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:241
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG12106-RA
Protein status:BS24150.pep: full length peptide match
Sequenced Size:668

Clone Sequence Records

BS24150.complete Sequence

668 bp assembled on 2011-01-28

GenBank Submission: KX800612

> BS24150.complete
GAAGTTATCAGTCGACATGGACACATTGCCGGGAAGTTCCTCCGCCCTGA
GCACAGACGACGAGCAAACTGCCCTGATTTCCCCCACTGTGGTGGCCGGC
TTAAAGAACCTGGGTGCCATCATTTCGCTGCCACTCACCAAACTGCTCAT
TGCCAATTCCTTGAAACTGACGCTCCATCCAGATGCCACCATTGCTCCGG
TGCCCGAGCTGTATGCCAAGAACGCCGCCTGCGCCAAACAGAGCGAGTAC
GCGGTGGTCACCCTCTTCGCCCTGGGCACCAAGCACGGCTGGGATGGCCT
TCAATTGCGCCAGCAGCTGGAGCAACTCAACCTCGATGCAGCTGCCGTCG
ACGAGCTGAGTCGCGTTTACGAGGACAGCCGCAAGGATCTAATTCTCCGC
CAACTGCAAATAGGCCATAGCTTTCCGCACATTACCGACATCCAGTGGCG
CATCGTGTGCGACGTGAAGTCTTCCACCTCGGACTGCAGCACGGGCGCGG
CCTGCTTCCACATCAATCTGGGCAACTTTCGGCAGAGCAGCGGCGAGCGG
GTGACCATCGTTGAGTTTGTCTGCAATGCCGAGGAGCTGCAGTCGCTAAT
CAATCGTCTCAAGGAGATCGAGCGGCACTGCCAACAGATGGCCGTGGTCT
AGAAGCTTTCTAGACCAT

BS24150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-RA 636 CG12106-PA 1..636 17..652 3180 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-RA 1372 CG12106-RA 137..774 15..652 3190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9194272..9194735 189..652 2320 100 Plus
X 23542271 X 9194034..9194207 15..188 870 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:45:30 has no hits.

BS24150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:20 Download gff for BS24150.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 95..730 17..652 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:02 Download gff for BS24150.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 139..774 17..652 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:48 Download gff for BS24150.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 139..774 17..652 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:48 Download gff for BS24150.complete
Subject Subject Range Query Range Percent Splice Strand
X 9194036..9194207 17..188 100 -> Plus
X 9194272..9194735 189..652 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:02 Download gff for BS24150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9088069..9088240 17..188 100 -> Plus
arm_X 9088305..9088768 189..652 100   Plus

BS24150.pep Sequence

Translation from 16 to 651

> BS24150.pep
MDTLPGSSSALSTDDEQTALISPTVVAGLKNLGAIISLPLTKLLIANSLK
LTLHPDATIAPVPELYAKNAACAKQSEYAVVTLFALGTKHGWDGLQLRQQ
LEQLNLDAAAVDELSRVYEDSRKDLILRQLQIGHSFPHITDIQWRIVCDV
KSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLINRLKE
IERHCQQMAVV*

BS24150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-PA 211 CG12106-PA 1..211 1..211 1070 100 Plus