BS24153.complete Sequence
461 bp assembled on 2011-01-28
GenBank Submission: KX802548
> BS24153.complete
GAAGTTATCAGTCGACATGGCGGATCGGCTTACACAATTGCAAGACACCG
TTAATCAGCAAGCGGAGCACTTCTGCAATGCTATTGGTGTAATTCAACAA
ACGTCCCTTCCAAGTAAATTTGTTAATTTTGAACGCATTGGACCCCAAAC
GCCAATCCCATGTCCGCCGCAAGAAGACTATGCCCAATTATTTGCACAGT
TAATTGCACGATGTGCTAAAGACATCGACACCTTAATCGAGTCTCTTCCA
AATGAAGACAGCTCCATTGAACTCCAAAATTCTAGCCTTAAGAGGCTCGA
GATCGAAAACCAGGGAACTGCAAGAGACCTAGAGGAAGTAGTGCAAAAAG
GCGAACTTTTGCTAGAAAAAATGCAGTATTCTTTGGAATGCATTGCTCAG
GCTCAATTAGATATGCAAATAACACTCAAACATGATTTACAATAGAAGCT
TTCTAGACCAT
BS24153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:45:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED21-RA | 429 | CG17397-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
MED21-RB | 429 | CG17397-PB | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED21-RA | 859 | CG17397-RA | 136..564 | 17..445 | 2145 | 100 | Plus |
MED21-RB | 863 | CG17397-RB | 140..568 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 25115219..25115608 | 445..56 | 1950 | 100 | Minus |
3L | 28110227 | 3L | 25115662..25115703 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:45:54 has no hits.
BS24153.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:20 Download gff for
BS24153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED21-RB | 160..588 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:12 Download gff for
BS24153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED21-RB | 140..568 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:58 Download gff for
BS24153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED21-RB | 140..568 | 17..445 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:58 Download gff for
BS24153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 25115219..25115605 | 59..445 | 100 | <- | Minus |
3L | 25115662..25115703 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:12 Download gff for
BS24153.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3LHet | 600675..601061 | 59..445 | 100 | <- | Minus |
3LHet | 601118..601159 | 17..58 | 100 | | Minus |
BS24153.pep Sequence
Translation from 16 to 444
> BS24153.pep
MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPIPCP
PQEDYAQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQG
TARDLEEVVQKGELLLEKMQYSLECIAQAQLDMQITLKHDLQ*
BS24153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED21-PA | 142 | CG17397-PA | 1..142 | 1..142 | 721 | 100 | Plus |
MED21-PB | 142 | CG17397-PB | 1..142 | 1..142 | 721 | 100 | Plus |