BS24155.complete Sequence
674 bp assembled on 2011-01-28
GenBank Submission: KX802704
> BS24155.complete
GAAGTTATCAGTCGACATGGCTCACTCGAACAAGGCTCGCAAAGCAGCCA
AAGAGGCAAACGCCAAGAAGTCTGCGGGATCGGGAACAGAGAGCAAACCG
GAGCACGTAAAGATACATGGCCCAGGCGATCGTAGTGCAGGAGTTCTGAC
TGGCGACCAGTTCCTGGAGAGCTTGCTCCAGACTCTCTACAGGTCATGGC
TTCAAATCTGCCGCCTGGCAGATTTTGTGATGTCCGAGCTAGGTGGAAAT
GATTTCCTGGAGGCCACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGC
TATCTGCCTGCTAGCTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAA
TATTTGGGTTTGGAATAGCCACCATGGTTATGACCTTTACAGGTTTGCTG
GTGCTAGAAGGCACACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTG
CCTGGGAGGACTAGTCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTG
CTGCCTATTTCGGATTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAG
ATCCATAAGAGCGCGTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGG
CGATCCGCCGCCAGCTGCTGTGACCATAACCGATGAACCCACTTCTACGA
CTGCATAAAAGCTTTCTAGACCAT
BS24155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:46:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RA | 642 | CG32803-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
| CG32803-RC | 729 | CG32803-PC | 90..729 | 19..658 | 3200 | 100 | Plus |
| CG32803-RD | 624 | CG32803-PD | 1..624 | 17..658 | 2905 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RA | 818 | CG32803-RA | 108..752 | 15..659 | 3225 | 100 | Plus |
| CG32803-RC | 905 | CG32803-RC | 199..839 | 19..659 | 3205 | 100 | Plus |
| CG32803-RD | 800 | CG32803-RD | 108..734 | 15..659 | 2920 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1900765..1901015 | 659..409 | 1255 | 100 | Minus |
| X | 23542271 | X | 1901064..1901277 | 411..198 | 1070 | 100 | Minus |
| X | 23542271 | X | 1901436..1901615 | 198..19 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:46:12 has no hits.
BS24155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:21 Download gff for
BS24155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RA | 137..776 | 17..656 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:18 Download gff for
BS24155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RA | 110..749 | 17..656 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:04 Download gff for
BS24155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RA | 110..749 | 17..656 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:04 Download gff for
BS24155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1901065..1901277 | 198..410 | 100 | <- | Minus |
| X | 1901437..1901616 | 17..197 | 99 | | Minus |
| X | 1900768..1901013 | 411..656 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:18 Download gff for
BS24155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1794801..1795046 | 411..656 | 100 | <- | Minus |
| arm_X | 1795098..1795310 | 198..410 | 100 | <- | Minus |
| arm_X | 1795470..1795649 | 17..197 | 99 | | Minus |
BS24155.pep Sequence
Translation from 16 to 657
> BS24155.pep
MAHSNKARKAAKEANAKKSAGSGTESKPEHVKIHGPGDRSAGVLTGDQFL
ESLLQTLYRSWLQICRLADFVMSELGGNDFLEATAAWCTRNPHVAICLLA
GGLVFMLPFLIIFGFGIATMVMTFTGLLVLEGTLLTIVSMVFFACLGGLV
IMVPLFGVAAVAAYFGFAQVYGLCDGIEIHKSAWVMFFRDQRKAGDPPPA
AVTITDEPTSTTA*
BS24155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-PA | 213 | CG32803-PA | 1..213 | 1..213 | 1103 | 100 | Plus |
| CG32803-PC | 242 | CG32803-PC | 31..242 | 2..213 | 1098 | 100 | Plus |
| CG32803-PD | 207 | CG32803-PD | 1..207 | 1..213 | 1059 | 97.2 | Plus |
| CG32803-PB | 142 | CG32803-PB | 1..142 | 72..213 | 738 | 100 | Plus |
