BS24164.complete Sequence
1652 bp assembled on 2011-02-03
GenBank Submission: KX805982
> BS24164.complete
GAAGTTATCAGTCGACATGCACCAGATGACCAACGTTCCCGGCTTCGTAA
ACCTGTCGTGCACCTTCCAGGACCAGCGTTCTCTTTACTTTGTGATGACG
TACGCGCGAAAGGGCGACATGTTGCCATACATCAACCGCGTGGGTAGCTT
TGACGTGGCCTGCACGCGCCACTACGCTGCCGAGCTTCTGCTGGCCTGCG
AGCACATGCACCGCCGTAATGTGGTGCACCGCGACCTCAAGCCCGAGAAC
ATCCTGCTCGACGAGGACATGCACACGCTAATCGCCGACTTCGGTTCCGC
CAAGGTGATGACAGCCCACGAAAGGGCTCTGGCCACGGAGCACTGTTCGG
AGCAGCGGCGCAGCAACTCCGATGAAGACGATGAAGACAGCGACCGCCTG
GAAAACGAAGACGAAGACTTCTACGATCGCGATTCGGAGGAGTTGGACGA
CGGCGACGACGAACAGCAGCAGGAAGAGATGGACTCCCCACGCCATCGTC
AAAGGCGTTACAACCGTCACCGAAAGGCAAGCTTTGTGGGCACTGCCCAG
TACGTTTCACCGGAAGTGCTCCAAAATGGACCTATAACCCCGGCGGCGGA
CCTGTGGGCACTGGGATGTATAGTTTATCAGATGATCGCCGGCCTACCGC
CATTCCGTGGCAGCAACGATTATGTCATTTTTAAAGAGATTCTTGACTGC
GCCGTGGACTTCCCGCAAGGCTTTGATAAGGACGCCGAGGACCTGGTGCG
CAAGCTGCTCCGTGTCGATCCGCGAGACCGCCTGGGTGCTCAAGACGAGT
TTGGATATTACGAATCCATTCGGGCGCACCCATTCTTCGCCGGCATTGAC
TGGCAGACGCTCCGTCAACAAACCCCTCCCCCCATCTACCCATACTTACC
GGGCGTAAGTCAGGATGAGGACTTCAGGTCCAGCTATACTGTGCCCGGGG
ATTTGGAGCCTGGCCTTGACGAACGGCAGATATCGCGACTGCTTAGTGCA
GAATTAGGCGTTGGCAGCAGCGTGGCCATGCCCGTCAAGCGATCGACCGC
AAAGAACTCTTTCGACCTGAACGATGCCGAGAAGCTGCAGCGTCTCGAGC
AACAAAAGACTGACAAGTGGCACGTTTTTGCCGACGGCGAAGTGATCCTC
AAGAAGGGGTTTGTCAACAAGCGCAAGGGTCTGTTTGCCCGCAAGCGAAT
GCTCCTTCTGACCACGGGACCGCGACTCATCTATATCGATCCCGTGCAGA
TGATCAAAAAAGGAGAAATTCCGTGGAGCCCAGATCTCCGAGCGGAGTAC
AAAAACTTCAAAATTTTTTTTGTCCATACGCCAAATCGAACCTATTACCT
GGATGATCCCGAAGGCTATGCTATCCACTGGTCGGAAGCTATTGAGAACA
TGCGCAAGTTGGCCTACGGAGATCCCTCCTCCACATCTGCAGTGTCCTGC
TCCAGCGGCAGCAGTAATAGCCTGGCTGTCATCTCAAATTCATCCGCCGC
CTCCTCAAGCAATTCGCCCACGGTGAAACGCAGTTCCCCCGTAAACGCTC
CTCAAGCTTCGACGGCGTCTGACAACCGGACATTGGGTAGCACCAGAACG
GGGACGTCACCTAGCAAGAAGACGGCGTCTAAGTAAAAGCTTTCTAGACC
AT
BS24164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-RJ | 2511 | CG1210-PJ | 892..2511 | 17..1636 | 8085 | 99.9 | Plus |
| Pdk1-RF | 2268 | CG1210-PF | 649..2268 | 17..1636 | 8085 | 99.9 | Plus |
| Pdk1-RH | 2268 | CG1210-PH | 649..2268 | 17..1636 | 8085 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-RJ | 4959 | CG1210-RJ | 1265..2885 | 17..1637 | 8090 | 99.9 | Plus |
| Pdk1-RF | 4162 | CG1210-RF | 1070..2690 | 17..1637 | 8090 | 99.9 | Plus |
| Pdk1-RH | 4347 | CG1210-RH | 1255..2875 | 17..1637 | 8090 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 141841..142879 | 17..1055 | 5180 | 99.9 | Plus |
| 3L | 28110227 | 3L | 143514..143821 | 1330..1637 | 1540 | 100 | Plus |
| 3L | 28110227 | 3L | 142943..143217 | 1056..1330 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:00:20 has no hits.
BS24164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:24 Download gff for
BS24164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pk61C-RB | 377..1994 | 17..1634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:45 Download gff for
BS24164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdk1-RF | 1070..2687 | 17..1634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:16:07 Download gff for
BS24164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pdk1-RH | 1255..2872 | 17..1634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:16:07 Download gff for
BS24164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 141841..142879 | 17..1055 | 99 | -> | Plus |
| 3L | 142943..143217 | 1056..1330 | 100 | -> | Plus |
| 3L | 143515..143818 | 1331..1634 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:45 Download gff for
BS24164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 141841..142879 | 17..1055 | 99 | -> | Plus |
| arm_3L | 142943..143217 | 1056..1330 | 100 | -> | Plus |
| arm_3L | 143515..143818 | 1331..1634 | 100 | | Plus |
BS24164.pep Sequence
Translation from 16 to 1635
> BS24164.pep
MHQMTNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGSFDVACT
RHYAAELLLACEHMHRRNVVHRDLKPENILLDEDMHTLIADFGSAKVMTA
HERALATEHCSEQRRSNSDEDDEDSDRLENEDEDFYDRDSEELDDGDDEQ
QQEEMDSPRHRQRRYNRHRKASFVGTAQYVSPEVLQNGPITPAADLWALG
CIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKDAEDLVRKLLRV
DPRDRLGAQDEFGYYESIRAHPFFAGIDWQTLRQQTPPPIYPYLPGVSQD
EDFRSSYTVPGDLEPGLDERQISRLLSAELGVGSSVAMPVKRSTAKNSFD
LNDAEKLQRLEQQKTDKWHVFADGEVILKKGFVNKRKGLFARKRMLLLTT
GPRLIYIDPVQMIKKGEIPWSPDLRAEYKNFKIFFVHTPNRTYYLDDPEG
YAIHWSEAIENMRKLAYGDPSSTSAVSCSSGSSNSLAVISNSSAASSSNS
PTVKRSSPVNAPQASTASDNRTLGSTRTGTSPSKKTASK*
BS24164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pdk1-PJ | 836 | CG1210-PJ | 298..836 | 1..539 | 2833 | 100 | Plus |
| Pdk1-PF | 755 | CG1210-PF | 217..755 | 1..539 | 2833 | 100 | Plus |
| Pdk1-PH | 755 | CG1210-PH | 217..755 | 1..539 | 2833 | 100 | Plus |
| Pdk1-PA | 755 | CG1210-PA | 217..755 | 1..539 | 2833 | 100 | Plus |
| Pdk1-PD | 836 | CG1210-PD | 298..836 | 1..539 | 2833 | 100 | Plus |
