BS24175.complete Sequence
869 bp assembled on 2011-01-28
GenBank Submission: KX803494
> BS24175.complete
GAAGTTATCAGTCGACATGAGCGCAGAGAAGTCCGATAAGGCCAAGATCA
GTGCCCAAATCAAGCACGTGCCGAAGGACGCGCAGGTGATCATGTCCATC
CTGAAGGAGCTGAATGTCCAGGAGTACGAGCCGCGCGTGGTCAACCAACT
GCTGGAGTTCACCTTCCGCTATGTAACCTGCATTCTGGACGACGCCAAGG
TGTACGCCAACCATGCGCGCAAGAAGACCATCGACTTGGACGACGTGCGT
CTGGCCACCGAGGTTACGCTGGACAAGAGCTTCACCGGGCCGTTGGAGCG
CCACGTTCTAGCCAAGGTGGCCGACGTGCGCAACAGCATGCCCCTGCCAC
CCATTAAGCCGCACTGCGGTCTCCGACTGCCGCCCGACCGCTACTGTCTC
ACCGGCGTCAACTACAAACTGCGGGCCACTAATCAGCCCAAGAAAATGAC
CAAGTCGGCGGTGGAGGGCCGTCCACTGAAGACCGTCGTTAAGCCCGTCT
CCAGCGCCAATGGTCCGAAGAGGCCACACTCCGTGGTGGCCAAGCAGCAG
GTGGTGACCATTCCCAAGCCCGTCATCAAGTTTACCACCACTACGACAAC
GAAAACGGTGGGCAGCTCCGGCGGATCTGGGGGCGGCGGTGGTCAGGAGG
TTAAGAGCGAGAGCACCGGCGCCGGCGGAGATCTCAAGATGGAGGTGGAC
AGCGATGCGGCGGCCGTGGGCAGCATCGCTGGCGCATCCGGTTCGGGAGC
AGGAAGTGCCAGCGGAGGAGGAGGAGGAGGAGGATCATCTGGCGTTGGAG
TGGCCGTCAAGCGGGAACGTGAGGAGGAGGAGTTTGAGTTTGTGACCAAC
TAGAAGCTTTCTAGACCAT
BS24175.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:49:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-RA | 837 | CG6474-PA | 1..837 | 17..853 | 4185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-RA | 1124 | CG6474-RA | 99..935 | 17..853 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17842474..17843159 | 168..853 | 3430 | 100 | Plus |
| X | 23542271 | X | 17842259..17842410 | 17..168 | 760 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 800..770 | 110 | 83.9 | Minus |
BS24175.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:24 Download gff for
BS24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 85..921 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:31 Download gff for
BS24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 99..935 | 17..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:09 Download gff for
BS24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 99..935 | 17..853 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:09 Download gff for
BS24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17842259..17842409 | 17..167 | 100 | -> | Plus |
| X | 17842474..17843159 | 168..853 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:31 Download gff for
BS24175.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17736292..17736442 | 17..167 | 100 | -> | Plus |
| arm_X | 17736507..17737192 | 168..853 | 100 | | Plus |
BS24175.pep Sequence
Translation from 16 to 852
> BS24175.pep
MSAEKSDKAKISAQIKHVPKDAQVIMSILKELNVQEYEPRVVNQLLEFTF
RYVTCILDDAKVYANHARKKTIDLDDVRLATEVTLDKSFTGPLERHVLAK
VADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKLRATNQPKKMTKSAVE
GRPLKTVVKPVSSANGPKRPHSVVAKQQVVTIPKPVIKFTTTTTTKTVGS
SGGSGGGGGQEVKSESTGAGGDLKMEVDSDAAAVGSIAGASGSGAGSASG
GGGGGGSSGVGVAVKREREEEEFEFVTN*
BS24175.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-PA | 278 | CG6474-PA | 1..278 | 1..278 | 1413 | 100 | Plus |
