Clone BS24179 Report

Search the DGRC for BS24179

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:241
Well:79
Vector:pDNR-Dual
Associated Gene/TranscriptCG32855-RA
Protein status:BS24179.pep: gold
Sequenced Size:1691

Clone Sequence Records

BS24179.complete Sequence

1691 bp assembled on 2011-02-15

GenBank Submission: KX802714

> BS24179.complete
GAAGTTATCAGTCGACATGTACAAGCACACGGTCAAGTCCAAGTTGAGCC
AGGTGCGCAGTAACCCGCCACCCCCTGCCGCTGCCTCGCCAACAACACAC
AAACATGGATTGGGGGCAGGCAAGAAGTTCTTCTCCAATATACGCCACAA
AATCGAGGATAATTTGACGCCCAAGTTGAGTGGAAAACTATATTACAAAG
GCAGCAAGCACACCAGATCCATGAGTGCACTCTGCACGGTGGATGGCGGA
TGTGTGGGTGGGAAGTATACGCCGAAGGTTGTGCCCACAAGTCCCGTACC
ACTTCAAATGCCCAGCCAGATGAGCAGCAGTGTGTGCAGCTATGTGGACA
GCGATGAGGAAAGTCACCTGAGCCTGAGTCTCAATTTGGCGCAGCAGTCG
CTCGAGGATGAGATCTTCGCAGAGCTAGAGAAGGTGGCACACGATGAGAG
CAAACTGAACGAGGTGCTTCAAAGCTTTGACCAGATACTAAACGAGTATC
CACCTTTGGAGGGAATTATATTAGCTCCTCAAGAGGAGCTGCCCGCTCCA
CCGGCGGAGTTCAGCGATCGCCAGCCAATGTTGTCAAAGTCACACAGTAC
TCTAAGCATGGGCAGGACTAGGATGCAGGTGTACCAGTCCCCGGAATTGG
CGGGATCTGTGTTGCTACTACGCGGAGCCGGAGGCGATTCCAGATACAAC
TCCCTGAGTGATCTTAGCGGCAGCAGGATACCGGTACGCAAACAATCGAG
TCTGCGCAAGCGCAGCGAAAGTTTTTGCCTCGAGCAACCGGTTTGCTCCA
GGACATCCAGTAAGCAGCGCACTCGGTCCATGCTGACCCTTAATACAGCT
GCACCTGTAGGATCAACCATTCCGAATGCTGTAGCCATGCCGAAGCGAGC
AAACTCCAGCCTCGAAAAGAGACACATAACTGCCAGACCAGCGGCCAGGA
GAGCAAACTCCACCCTGAAACCGGGTGGGATAAAGCCAAAATCGCCCAAT
GCAAACAGCGATGAACTGCTCGTGAAGTGTTTGGCCAAAGGACAGGAGAT
CCTGCGTCAGGTGGAGAGCATGAGTGCCAAGCCCAAGAGGAGCACCAGTC
GGGGAGTAACCAAGGAGCACTCGCAGTTGGTGAAGAACAAGAAGAAGCTA
CAGAAGCTGCATTACGCCAACGAGGAGAAGATGGGCAGACCCAAACTTGA
GTCCTGCAAGATTATACCGCCGAAACTAGGGGAAACATCCGACAAAAATC
AGGAACTACTCGTAAAAGTTGTCCAGGATATAAAGATCACACCACAACAG
AATCTAAAGAAACCCACAAAGGAAATCCGCGCAGAGCAAGAAGAGGATTC
TGATGATTCGGGACACATAAGCAACACACAGCTCTCCACATCCACGAGCA
ACTCCACCGGTAGCCTTTGTGAATCTGAAGGCGATGAAGCGGAGGATCAA
CCGCCGGATGCAAAAAGCTGTACCAAATCCAACAAGATCGCGGAGCTTTT
ACAGAAATTCGAAGCAGCTGCGGCGGCTGGGAAAAAAAGTGCCACCGCCA
CGATGCACTGCCCCACTGTGGTGGCCAGCAAGGTGGTGGCCCAGGTGCAA
GCTGTGAGCTGCATTCAGACACAGGTGGAGATCTATCCCACCTACACGAA
AGAGGTAACTATGCGGCTGCACTGAAAGCTTTCTAGACCAT

BS24179.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32855-RA 1659 CG32855-PA 1..1659 17..1675 8295 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG32855-RA 2013 CG32855-RA 208..1866 17..1675 8295 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16079127..16080785 1675..17 8295 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:57:39 has no hits.

BS24179.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:42 Download gff for BS24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG32855-RA 214..1871 17..1674 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:58 Download gff for BS24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG32855-RA 214..1871 17..1674 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:35:03 Download gff for BS24179.complete
Subject Subject Range Query Range Percent Splice Strand
CG32855-RA 208..1865 17..1674 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:35:03 Download gff for BS24179.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16079128..16080785 17..1674 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:58 Download gff for BS24179.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11904850..11906507 17..1674 100   Minus

BS24179.pep Sequence

Translation from 16 to 1674

> BS24179.pep
MYKHTVKSKLSQVRSNPPPPAAASPTTHKHGLGAGKKFFSNIRHKIEDNL
TPKLSGKLYYKGSKHTRSMSALCTVDGGCVGGKYTPKVVPTSPVPLQMPS
QMSSSVCSYVDSDEESHLSLSLNLAQQSLEDEIFAELEKVAHDESKLNEV
LQSFDQILNEYPPLEGIILAPQEELPAPPAEFSDRQPMLSKSHSTLSMGR
TRMQVYQSPELAGSVLLLRGAGGDSRYNSLSDLSGSRIPVRKQSSLRKRS
ESFCLEQPVCSRTSSKQRTRSMLTLNTAAPVGSTIPNAVAMPKRANSSLE
KRHITARPAARRANSTLKPGGIKPKSPNANSDELLVKCLAKGQEILRQVE
SMSAKPKRSTSRGVTKEHSQLVKNKKKLQKLHYANEEKMGRPKLESCKII
PPKLGETSDKNQELLVKVVQDIKITPQQNLKKPTKEIRAEQEEDSDDSGH
ISNTQLSTSTSNSTGSLCESEGDEAEDQPPDAKSCTKSNKIAELLQKFEA
AAAAGKKSATATMHCPTVVASKVVAQVQAVSCIQTQVEIYPTYTKEVTMR
LH*

BS24179.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:11:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG32855-PA 552 CG32855-PA 1..552 1..552 2806 100 Plus