Clone BS24182 Report

Search the DGRC for BS24182

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:241
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG10176-RB
Protein status:BS24182.pep: full length peptide match
Sequenced Size:758

Clone Sequence Records

BS24182.complete Sequence

758 bp assembled on 2011-01-28

GenBank Submission: KX803430

> BS24182.complete
GAAGTTATCAGTCGACATGTCGGTCAGGAAGTTGAGTGCCCTATCGCTCT
CCATTGGTGGAGTTCCGTTGATTCCAAGTGTTTCCTTGGTAGCTGCGGCC
AATGGAGAGAGTAGGGATTGCCATGGCACGATCTGTCATCCGGTCAATGA
ATTTTGCTATGTTGCAACGGAGAGATGTCATCCGTGCATCGAGGTCTGCA
ATAATCAAACCCACAACTACGATGCGTTTCTGTGCGCCAAGGAATGTTCA
GCTTACAAGACATTTGAGCCGTTAAAAGCCGAGATGCTGGACATCCAGAA
TACCCAGCAGCTGATCCTCTTGCTGCTGACTATCCTTCTCGTCCTGATTG
CGCTTCGTTGCGCGTTTCAGTTCCTTCGATGGCTGATAGGCAATCGGTGC
TTCCAGAAGCTGATGCGCCGTCTCCAATCGAAGGCCTACCCTCATCCGGC
AACTGCAAATGGAAAGGATCTTAATGCTACCACCATACAGAATCTGAATG
CCATTAACCATCCCGGCAGCGACCTTGAGCGGGCACAATCACAGATCTAC
AGTGTGGCAGGTGCTGCCGAGGGTTCCGTTGTGACTATGACAACGCCGGT
GAGCACTCGCTATCCGGCGGAAAACAGTACCACGCCCACAACGGTTATGA
CGGAGATCGGATACGGATACGATAATCAGGCCATGGTCGTAACGCCGGTT
TCCGAGAAACCCTCAGCAGCGACGATTCCCGTCGCTTTCTAAAAGCTTTC
TAGACCAT

BS24182.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10176-RC 726 CG10176-PC 1..726 17..742 3630 100 Plus
CG10176-RB 726 CG10176-PB 1..726 17..742 3630 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG10176-RC 2100 CG10176-RC 552..1277 17..742 3630 100 Plus
CG10176-RB 1789 CG10176-RB 552..1277 17..742 3630 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18486623..18486936 249..562 1570 100 Plus
2L 23513712 2L 18485968..18486202 17..251 1175 100 Plus
2L 23513712 2L 18487014..18487198 558..742 925 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:48:28 has no hits.

BS24182.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:23 Download gff for BS24182.complete
Subject Subject Range Query Range Percent Splice Strand
CG10176-RB 515..1238 17..740 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:10 Download gff for BS24182.complete
Subject Subject Range Query Range Percent Splice Strand
CG10176-RB 552..1275 17..740 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:52 Download gff for BS24182.complete
Subject Subject Range Query Range Percent Splice Strand
CG10176-RB 552..1275 17..740 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:52 Download gff for BS24182.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18486626..18486934 252..560 100 -> Plus
2L 18487017..18487196 561..740 100   Plus
2L 18485968..18486202 17..251 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:10 Download gff for BS24182.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18485968..18486202 17..251 100 -> Plus
arm_2L 18486626..18486934 252..560 100 -> Plus
arm_2L 18487017..18487196 561..740 100   Plus

BS24182.pep Sequence

Translation from 16 to 741

> BS24182.pep
MSVRKLSALSLSIGGVPLIPSVSLVAAANGESRDCHGTICHPVNEFCYVA
TERCHPCIEVCNNQTHNYDAFLCAKECSAYKTFEPLKAEMLDIQNTQQLI
LLLLTILLVLIALRCAFQFLRWLIGNRCFQKLMRRLQSKAYPHPATANGK
DLNATTIQNLNAINHPGSDLERAQSQIYSVAGAAEGSVVTMTTPVSTRYP
AENSTTPTTVMTEIGYGYDNQAMVVTPVSEKPSAATIPVAF*

BS24182.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10176-PC 241 CG10176-PC 1..241 1..241 1254 100 Plus
CG10176-PB 241 CG10176-PB 1..241 1..241 1254 100 Plus