BS24185.complete Sequence
851 bp assembled on 2011-02-03
GenBank Submission: KX802252
> BS24185.complete
GAAGTTATCAGTCGACATGGCGCGCAATGCAGAGAAGGCAATGACAACTT
TGGCACGTTGGCGGGCCGCAAAAGAAGTGGAATCTGGTGAAAAGGAACGC
CGGCCCTATTTGGCCTCCGAGTGCCACGATTTGCCCAGATGTGAGAAGTT
CCGCCTGGAGATAATACGCGACATATCGAAGAAGGTGGCCCAGATACAGA
ATGCTGGCTTGGGAGAATTCCGGATTCGCGATCTGAACGATGAAATCAAC
AAGTTATTGCGTGAGAAACGGCATTGGGAAAATCAGATATCCTCATTGGG
TGGCCCCCACTATAGACGCTATGGTCCCAAGATGTTCGATGCGGAGGGCC
GTGAAGTTCCCGGCAATCGAGGCTACAAATACTTTGGAGCCGCCAAGGAT
CTGCCGGGTGTTCGCGAGCTCTTTGAACAGGATCCTCCGCCGCCACCCAG
GAAATCACGCGCTGAACTAATGAAGGACATAGATGCCGAATACTACGGCT
ATCGAGATGACGAAGATGGTGTTCTGATCCCTCTGGAGGAACGCATCGAA
CGAGCGGCCATTCAGAAGGCCGTGCAGGAATGGCGGGAGAAAATGGCCAG
AGATGGTCGCATAATCGATGACGAAGAGGAGGATGAAATATATCCCCTTT
CGGGACCAGCACGCGAAGCCATCGAGGATGCCAAGGCTCGAGCCGCCGTG
GAGGATCCTCATGGCCTATTGGCATCCAAGTTCACCGCTCACGTTCCCGT
GCCGACGCAACAAGATGTACAGGAAGCACTGCTGCGCCAGCGGAAACGGG
AACTGCTGGAGAAATACGCCGGTGGCACTAACTAAAAGCTTTCTAGACCA
T
BS24185.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:59:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-RA | 819 | CG9667-PA | 1..819 | 17..835 | 4095 | 100 | Plus |
| CG9667-RB | 795 | CG9667-PB | 1..795 | 41..835 | 3975 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-RA | 883 | CG9667-RA | 43..861 | 17..835 | 4095 | 100 | Plus |
| CG9667-RB | 838 | CG9667-RB | 1..816 | 20..835 | 4080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8125312..8125944 | 835..203 | 3165 | 100 | Minus |
| 3R | 32079331 | 3R | 8126005..8126165 | 203..43 | 805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:59:53 has no hits.
BS24185.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:24 Download gff for
BS24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 19..835 | 17..833 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:27 Download gff for
BS24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..859 | 17..833 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:53 Download gff for
BS24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..859 | 17..833 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:53 Download gff for
BS24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8125314..8125943 | 204..833 | 100 | <- | Minus |
| 3R | 8126005..8126165 | 43..203 | 100 | <- | Minus |
| 3R | 8126229..8126253 | 17..42 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:27 Download gff for
BS24185.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3951036..3951665 | 204..833 | 100 | <- | Minus |
| arm_3R | 3951727..3951887 | 43..203 | 100 | <- | Minus |
| arm_3R | 3951951..3951975 | 17..42 | 96 | | Minus |
BS24185.pep Sequence
Translation from 16 to 834
> BS24185.pep
MARNAEKAMTTLARWRAAKEVESGEKERRPYLASECHDLPRCEKFRLEII
RDISKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYR
RYGPKMFDAEGREVPGNRGYKYFGAAKDLPGVRELFEQDPPPPPRKSRAE
LMKDIDAEYYGYRDDEDGVLIPLEERIERAAIQKAVQEWREKMARDGRII
DDEEEDEIYPLSGPAREAIEDAKARAAVEDPHGLLASKFTAHVPVPTQQD
VQEALLRQRKRELLEKYAGGTN*
BS24185.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-PA | 272 | CG9667-PA | 1..272 | 1..272 | 1423 | 100 | Plus |
| CG9667-PB | 264 | CG9667-PB | 1..264 | 9..272 | 1385 | 100 | Plus |
