BS24189.complete Sequence
1781 bp assembled on 2011-02-18
GenBank Submission: KX804605
> BS24189.complete
GAAGTTATCAGTCGACATGCGGCTGTTAGTGCTCTACGGGAGTCAAACCG
GCACCGCCCAGGATGTGGCGGAACAGATCTGGCGGGAGTCGCATCAACTG
GGCTTCCAAGGACCCGTGCTGCCTTTCGACGAGTACGATATGACCAAACT
TATTGAGGAGCGCCTCGTGGTCTTTGTGGTGGCCACTACGGGTGACGGAG
TGGAGCCGGATAACATGAAGCTGGCCTGGCGATTTCTCCTGAAGCGCAGC
TTACCCGCCCAATCCTTGCAAGGCATGCAGTTCGCGTGCCTTGGACTCGG
GGACTCCAGCTATCCGAAGTTTAACTATGCCGCCAAGAAACTGAGCAAGA
GACTACAGAATCTGGGAGCAAATAGCGTGTGTCCAGTGGGTCTGTGTGAT
GATCAGCATGACTACGGGCATTTGGGTGTATCCCTTAGCTGGACAAAGGA
TTTGTGGACAGCTCTGAAAGGCATCTCTGGTCTTGACGAAAGTAAACTTA
GCAACAGCCACCAAACTACTGTAAAGTGGTCAGTAAAGGAGCTGCCTAAG
GATTCCCAAATTGCTCCGATGGACAATCTGCTCTGGAGCCAAAAACAAAC
TGCCCACTCTTTCAAAATTCTGGATAACCAAAGAACAACGGCGGTGGATC
ACTTTCAGGATGTACGCTTCCTAAGGCTGCAGTGTCAGACTGAAGATCTT
AGCTGGGAACCCGGCGATGTACTCGATGTTCAGCCGCAAAACAGCGATGA
AGCTGTCCAAACATTCTTCGACCTTATTCGCGAACACAGCCTGAACTTCG
ATGAGAGCACTATAGTGGAGGTATCCAGTGCACATCAGGATATGCCCCTT
CCCATAGCCTATTCCAATCCCTTAAGCCTCCTCCAGGCCGCCAAATTCGT
TTGGGACTTGAGTGCTAAGCCACGGCAACGTTTCCTCGAGGTACTAGCAC
AGAATTGCTGCGATGAAATGGAAAAGGAAAAGCTGCTCGAATTCTCCTCC
GCGGAGGGAATTGATGACTTAGTGGCTTATGTGAACAGGCCGCGTCGTAA
TCTTTTGGAGGTTCTGGAGGATTTCCGGCACGCCACCTCTAGCTTAACTC
TGCAACAGCTCTTTGAGATGATGCCACTGATCCAGCCACGCAGTTTTTCC
ATTGCCTCGGATGTTTCCGCCTTAAGTTTGGACTTGCTGGTGGCCGTTGT
GGAGTACAAAACCATAATGCATACTCCACGTCTGGGCTTATGCTCCAACT
GGCTGAAGACTTTGAAATCGGGTACTGAGTTGAGCGGAGTTGTCAAAAGA
GGAACCATGGTCTGGCCAAAAGACTTAAGTATACCACTTATAATGGTAGG
ACCTGGCACAGGCATCGCTCCATTCCGTAGCATTATCCAAAACCGATTGT
ATGCTCAATCAAAAGGTGCCACAATTGGTCCCTTGGTTGTTTTCTTTGGC
TGTCGGAACAAAGCTGCCGATTTCCACTTTGGAAATGACTTCTCCACCTG
GACCGATGCGAAACAGGTAGAGGCCCATACTGCCTTCTCGAGGGATCAGG
ATCAGAAGGTCTATGTCCAGCATTTAATCGCCAAGAATGGTGCTCATCTG
GCGAGGCTTATAAAAGACCTGAATGCCTATATCTACGTGGCTGGCAACTC
CAATAATATGCCAAAGTCTGTCAAAGAGGCCTTTATCGAGATACTAGATG
GCGATGCCGATTACGTGGAACTAATGATAAAACAGCGACGATATCAGGAG
GAAACCTGGGCGTAAAAGCTTTCTAGACCAT
BS24189.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:37:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13667-RB | 1749 | CG13667-PB | 1..1749 | 17..1765 | 8745 | 100 | Plus |
| CG13667-RA | 1749 | CG13667-PA | 1..1749 | 17..1765 | 8745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:37:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13667-RB | 1846 | CG13667-RB | 32..1780 | 17..1765 | 8745 | 100 | Plus |
| CG13667-RA | 1880 | CG13667-RA | 66..1814 | 17..1765 | 8745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:37:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8405540..8407288 | 17..1765 | 8745 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:37:29 has no hits.
BS24189.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:38 Download gff for
BS24189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RB | 32..1778 | 17..1763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:23 Download gff for
BS24189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 66..1812 | 17..1763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:43 Download gff for
BS24189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13667-RA | 66..1812 | 17..1763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:43 Download gff for
BS24189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8405540..8407286 | 17..1763 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:23 Download gff for
BS24189.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8398640..8400386 | 17..1763 | 100 | | Plus |
BS24189.pep Sequence
Translation from 16 to 1764
> BS24189.pep
MRLLVLYGSQTGTAQDVAEQIWRESHQLGFQGPVLPFDEYDMTKLIEERL
VVFVVATTGDGVEPDNMKLAWRFLLKRSLPAQSLQGMQFACLGLGDSSYP
KFNYAAKKLSKRLQNLGANSVCPVGLCDDQHDYGHLGVSLSWTKDLWTAL
KGISGLDESKLSNSHQTTVKWSVKELPKDSQIAPMDNLLWSQKQTAHSFK
ILDNQRTTAVDHFQDVRFLRLQCQTEDLSWEPGDVLDVQPQNSDEAVQTF
FDLIREHSLNFDESTIVEVSSAHQDMPLPIAYSNPLSLLQAAKFVWDLSA
KPRQRFLEVLAQNCCDEMEKEKLLEFSSAEGIDDLVAYVNRPRRNLLEVL
EDFRHATSSLTLQQLFEMMPLIQPRSFSIASDVSALSLDLLVAVVEYKTI
MHTPRLGLCSNWLKTLKSGTELSGVVKRGTMVWPKDLSIPLIMVGPGTGI
APFRSIIQNRLYAQSKGATIGPLVVFFGCRNKAADFHFGNDFSTWTDAKQ
VEAHTAFSRDQDQKVYVQHLIAKNGAHLARLIKDLNAYIYVAGNSNNMPK
SVKEAFIEILDGDADYVELMIKQRRYQEETWA*
BS24189.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13667-PB | 582 | CG13667-PB | 1..582 | 1..582 | 3028 | 100 | Plus |
| CG13667-PA | 582 | CG13667-PA | 1..582 | 1..582 | 3028 | 100 | Plus |
| Cpr-PD | 679 | CG11567-PD | 84..679 | 3..582 | 602 | 28.5 | Plus |
| Cpr-PC | 679 | CG11567-PC | 84..679 | 3..582 | 602 | 28.5 | Plus |
| Cpr-PA | 679 | CG11567-PA | 84..679 | 3..582 | 602 | 28.5 | Plus |
