BS24192.complete Sequence
1262 bp assembled on 2011-02-03
GenBank Submission: KX801276
> BS24192.complete
GAAGTTATCAGTCGACATGGACGAGTCGGAGCTGCTATTCAATCTGTTTT
ATATTCTGTTGTGCATGGTGATCATCTACCCGCCAGAGGAGTTCCAACGC
CTGGGATTCACCATTGAACAGTTGTTCGCTCGGTTCCTGGGAGAAGAGTA
CCTGGACTTTGTAGGCTACCACCAGCGCCGTACTTCGCTGAATCTCTTCG
TGCACTCCTGTCTGCCCTTCTCCTACTTTCTTATTCATAGGCTCAAGTTC
TCCGTCTTCGCCACGCAGGAGCCCTTGGAGGACTTCGACCTGGACCCGGA
TTTCCCCATGCCCCAGGAAGCGGTAGCGTTTAAAACGCTTACGTGGAAAA
CCGCCCAGCGGTTCAGTGTGTTGGCCGTTCTGGCGATGCCCGCTCTGATC
TTCAACTGGCACCAGGAAAACTGGCGTCGGCACCCGATCAGCAAGGCGCT
CTCCAAGTACTCCATCACGCCGGGCAGCTACAGTGCCGTGGCTAGCGAAA
TTGGTATAGAGTTCCGGCAACCGGAAATATACAAGAAGAAGCTAAATTCC
ATTAGCTCGGTGATTGCCACGCAGAACTGGATAATAAAAACCACCATGTA
CAATGTTCACTTCGCCCATCAGAGCAACACGTCGCTTAGCGTAGCTAAGG
CAGAAACTTACAACATATCGCATCAAGACCAAAACGACACCTTGCAGATG
ATAAGCATTATTGTACGGCCAATGAGGCAGGGTGTGAGCGACTTCCACAT
ACGAATTAATGCCCTGGAGTTTAGGAATCTAGAGAACCGAGTCCGACGAC
CAATCGCAATTCCCTCCAACATTCAGTTACACCGCAATGTTATAGACCGT
TTTGTGGACGTCTTCAAGGCGCAAGTCGCCCAAAATCCCATTTTTCCAGA
TGATGCTACTACGGAAAAGTGTTTTGCCTGCATGCTAAACGAACCAAACA
CCAAGATCCACAAGCAGTGTGCCGACTTTGATCGCAATGGCGCTCCCTTG
GCGAACGGGGCGTGCTGCTCAAACTGCTACTGCCGGCCCATGTGGTGTGT
AGAGTGCCTAGCGCGCTGGTTTGCCGCTCGCCAAAGTGACGTGGATCGTG
AGGTGTGGCTGGAGCAGAAGTGCACATGCCCAATGTGCCGAGCCAAGTTT
TGTGTGCTTGATGTCAGCTACATCACAACCACAGTCGATGCAACTAACAG
TACTCAGAGTCAAGGCACCGAAGAAGATACTAATGACACCACGTGAAAGC
TTTCTAGACCAT
BS24192.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14646-RB | 1230 | CG14646-PB | 1..1230 | 17..1246 | 6150 | 100 | Plus |
| CG14646-RA | 1230 | CG14646-PA | 1..1230 | 17..1246 | 6150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14646-RB | 1582 | CG14646-RB | 59..1290 | 15..1246 | 6160 | 100 | Plus |
| CG14646-RA | 1694 | CG14646-RA | 59..1290 | 15..1246 | 6160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4390424..4391059 | 15..650 | 3180 | 100 | Plus |
| 3R | 32079331 | 3R | 4391109..4391707 | 648..1246 | 2995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:59:37 has no hits.
BS24192.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:23 Download gff for
BS24192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14646-RB | 52..1280 | 17..1245 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:18 Download gff for
BS24192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14646-RA | 61..1289 | 17..1245 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:47 Download gff for
BS24192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14646-RA | 61..1289 | 17..1245 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:47 Download gff for
BS24192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4390426..4391058 | 17..649 | 100 | -> | Plus |
| 3R | 4391111..4391706 | 650..1245 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:18 Download gff for
BS24192.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 216148..216780 | 17..649 | 100 | -> | Plus |
| arm_3R | 216833..217428 | 650..1245 | 100 | | Plus |
BS24192.pep Sequence
Translation from 16 to 1245
> BS24192.pep
MDESELLFNLFYILLCMVIIYPPEEFQRLGFTIEQLFARFLGEEYLDFVG
YHQRRTSLNLFVHSCLPFSYFLIHRLKFSVFATQEPLEDFDLDPDFPMPQ
EAVAFKTLTWKTAQRFSVLAVLAMPALIFNWHQENWRRHPISKALSKYSI
TPGSYSAVASEIGIEFRQPEIYKKKLNSISSVIATQNWIIKTTMYNVHFA
HQSNTSLSVAKAETYNISHQDQNDTLQMISIIVRPMRQGVSDFHIRINAL
EFRNLENRVRRPIAIPSNIQLHRNVIDRFVDVFKAQVAQNPIFPDDATTE
KCFACMLNEPNTKIHKQCADFDRNGAPLANGACCSNCYCRPMWCVECLAR
WFAARQSDVDREVWLEQKCTCPMCRAKFCVLDVSYITTTVDATNSTQSQG
TEEDTNDTT*
BS24192.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14646-PB | 409 | CG14646-PB | 1..409 | 1..409 | 2184 | 100 | Plus |
| CG14646-PA | 409 | CG14646-PA | 1..409 | 1..409 | 2184 | 100 | Plus |
