BS24235.complete Sequence
596 bp assembled on 2011-01-28
GenBank Submission: KX801824
> BS24235.complete
GAAGTTATCAGTCGACATGACCATCAAAAATTCGACTTGCTTTCGACATA
TTTGGGTTTCCACAGATGACAAACGAATTGCCATTGAGGCACAAAAGTAT
GGTGCCATAATACATCATCGGCCTGAGAAATTCGCCAGAGACGACACTCC
TTCACTTCATGCCATTTCGGAGTTCCTAGATGTTCATAGAAGTATTCATG
ACTTTGCTCTATTCCAATGCACATCTGTATTCCTGAAAACCAAGTATATT
CAAGAGGCTGTTCGAAAGTTTGAGTCCCATGACTGTGTTTTTGCCGCTAA
GAGATCACATTATCTGCGATGGAAGGTGGTCGATGGTGAATTGATGCCAG
CGGAATTCGATTTGAGTGCCAGGCCAAGACGCCAAGATTGGCAGGGTGAT
ATTGTAGAGACAGGAATGTTTTACTTCTCGAGGAGGAAACTGGTGGACAG
TGGGCTACTGCAAAACAATAGGTGCTCCGTTGTGGAAATCGATGCCAAGG
ATAGTCTGGAAATTGACTCTAGCCACGATCTGACTCTAGCCAAATACATC
TTAAGTAGTGAAACAAAAACCGAGTTATAGAAGCTTTCTAGACCAT
BS24235.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Csas-RA | 564 | CG32220-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Csas-RA | 758 | CG32220-RA | 153..718 | 17..582 | 2830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19988067..19988347 | 582..302 | 1405 | 100 | Minus |
| 3L | 28110227 | 3L | 19988401..19988605 | 303..99 | 1025 | 100 | Minus |
| 3L | 28110227 | 3L | 19988662..19988743 | 98..17 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:52:01 has no hits.
BS24235.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:30 Download gff for
BS24235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Csas-RA | 153..716 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:11:47 Download gff for
BS24235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Csas-RA | 153..716 | 17..580 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:16 Download gff for
BS24235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Csas-RA | 153..716 | 17..580 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:16 Download gff for
BS24235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19988069..19988345 | 304..580 | 100 | <- | Minus |
| 3L | 19988401..19988605 | 99..303 | 100 | <- | Minus |
| 3L | 19988662..19988743 | 17..98 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:11:47 Download gff for
BS24235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19981169..19981445 | 304..580 | 100 | <- | Minus |
| arm_3L | 19981501..19981705 | 99..303 | 100 | <- | Minus |
| arm_3L | 19981762..19981843 | 17..98 | 100 | | Minus |
BS24235.pep Sequence
Translation from 16 to 579
> BS24235.pep
MTIKNSTCFRHIWVSTDDKRIAIEAQKYGAIIHHRPEKFARDDTPSLHAI
SEFLDVHRSIHDFALFQCTSVFLKTKYIQEAVRKFESHDCVFAAKRSHYL
RWKVVDGELMPAEFDLSARPRRQDWQGDIVETGMFYFSRRKLVDSGLLQN
NRCSVVEIDAKDSLEIDSSHDLTLAKYILSSETKTEL*
BS24235.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Csas-PA | 187 | CG32220-PA | 1..187 | 1..187 | 980 | 100 | Plus |
