BS24238.complete Sequence
344 bp assembled on 2011-01-28
GenBank Submission: KX802522
> BS24238.complete
GAAGTTATCAGTCGACATGGAAAGGAAACCAAGTATACCAAAAATCAGGC
AGGTCAGCAGTCTTGGAAGTCAATTCACTTTTCCCAATATAGCGGATCTA
TTTTGCAATGCCGTCTCCATTCACAATGACTATTGTAAATTGCATTTTAT
AAACGAAAAGTTGCAATTCCATTTAAATGGAATGTTGGAAAGTAAAGATG
CTTCAGCGATTTACTATTTTAAGCAACATATTATTCTAAACTCGGATCAA
CTGGAATCTGCATCCAAAAATTATGACATGACCTTTCATACAATAATGAG
AAGGTGGGAAACTGACCGGAAAACGTAAAAGCTTTCTAGACCAT
BS24238.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490-RC | 405 | CG17490-PC | 94..405 | 17..328 | 1560 | 100 | Plus |
CG17490-RD | 312 | CG17490-PD | 1..312 | 17..328 | 1560 | 100 | Plus |
CG17490-RF | 393 | CG17490-PF | 1..284 | 17..300 | 1420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490-RC | 1394 | CG17490-RC | 217..529 | 17..329 | 1565 | 100 | Plus |
CG17490-RD | 1342 | CG17490-RD | 149..461 | 17..329 | 1565 | 100 | Plus |
CG17490-RF | 2953 | CG17490-RF | 1756..2039 | 17..300 | 1420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22540043..22540324 | 17..298 | 1410 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 16:50:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 42..82 | 179..138 | 108 | 76.2 | Minus |
BS24238.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:26 Download gff for
BS24238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RD | 147..456 | 17..326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:10:56 Download gff for
BS24238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RD | 147..456 | 17..326 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:28:31 Download gff for
BS24238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17490-RD | 149..458 | 17..326 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:28:31 Download gff for
BS24238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22540043..22540324 | 17..298 | 100 | -> | Plus |
2L | 22547540..22547567 | 299..326 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:10:56 Download gff for
BS24238.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22432775..22433056 | 17..298 | 100 | -> | Plus |
arm_2L | 22440272..22440299 | 299..326 | 100 | | Plus |
BS24238.pep Sequence
Translation from 16 to 327
> BS24238.pep
MERKPSIPKIRQVSSLGSQFTFPNIADLFCNAVSIHNDYCKLHFINEKLQ
FHLNGMLESKDASAIYYFKQHIILNSDQLESASKNYDMTFHTIMRRWETD
RKT*
BS24238.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17490-PD | 103 | CG17490-PD | 1..103 | 1..103 | 546 | 100 | Plus |
CG17490-PC | 134 | CG17490-PC | 32..134 | 1..103 | 546 | 100 | Plus |
CG17490-PF | 130 | CG17490-PF | 1..94 | 1..94 | 494 | 100 | Plus |
CG17490-PA | 130 | CG17490-PA | 1..94 | 1..94 | 494 | 100 | Plus |
CG17490-PG | 707 | CG17490-PG | 578..671 | 1..94 | 494 | 100 | Plus |