BS24276.complete Sequence
1118 bp assembled on 2011-02-03
GenBank Submission: KX805734
> BS24276.complete
GAAGTTATCAGTCGACATGTCCACCGGCCGCCGTTTGGCCAAGCGCTCCA
TCATCGGCACCAAGGTGTGCGCCAAGGGTCCGGATGGCCTCTGGTACTCC
GGCACCATATCCGACGTGAAAACGCCGCCCTCGTACAGCGGACCGCTCTC
GCCGCCGCCGCCGCCCACTTTTGTGGTGCCCGGCGAGGCACCGATTAATG
CCGATACGCGCTACCTGGTCCGTTTCGATTTCAAGACCGCCGTCGAGTCC
CCAACCGCTACCACGTCGTCCGCGGCCTCGACCTCGTCCACATCCTCCAC
AGATCCGTCGGTCATCGTGGAAACGCGTCGCGCTGCCAACGTACACATCA
GTCCCGCTCAGGCACTGCGTCGCAGCGCCATGATCAAGGAGTTCCGCGAG
TCGGATCTTATTGGACCCGGATTCCGGTCCATCATGGACACCGAACTGCA
GCCTGGCCAGCGGGTCTACTTCACCTACAATGGACGCGAGCAGAGCGGCG
ATGTCGTCAAACACGACGCTACCAAGGATGAGGTGATTGTCAAGATCACA
ACAGTTGGAAATGAGGAACCCATTGAGCTGAAGAAGCGACTGGAGGAAGT
GCGTCTGCTGGAATCGCGACGCTCCGCCCGTCTGGCAGACCAGGATCGCG
ACACGGACTTTGCCAGACTCGCCGACATGAGTGGCGAACGCCGCAGAACC
ACCACACACAGTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTC
CCGGAAACGTCCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAA
CATGCCGTGCAGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCAT
GGCTCAATGGCCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTC
CTGGAGCTCCGGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCC
ACCACAGCCCACACAATATCATGTCGCCCCACGATGCGGACAACGCACGC
ACACGCACAGCATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTA
CAAGGAGGAGCGCAAGAAAAAGGTGAGTAATTTCTCGCTTTGGACAGGCT
AAAAGCTTTCTAGACCAT
BS24276.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RD | 1086 | CG34360-PD | 1..1086 | 17..1102 | 5415 | 99.9 | Plus |
| Glut4EF-RH | 2226 | CG34360-PH | 1..1056 | 17..1072 | 5265 | 99.9 | Plus |
| Glut4EF-RG | 2853 | CG34360-PG | 1..1056 | 17..1072 | 5265 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RD | 4787 | CG34360-RD | 995..2080 | 17..1102 | 5415 | 99.9 | Plus |
| Glut4EF-RH | 10796 | CG34360-RH | 995..2050 | 17..1072 | 5265 | 99.9 | Plus |
| Glut4EF-RG | 4308 | CG34360-RG | 995..2050 | 17..1072 | 5265 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9875675..9876224 | 17..566 | 2750 | 100 | Plus |
| 3R | 32079331 | 3R | 9943677..9943904 | 855..1082 | 1110 | 99.1 | Plus |
| 3R | 32079331 | 3R | 9930362..9930545 | 564..747 | 920 | 100 | Plus |
| 3R | 32079331 | 3R | 9943481..9943587 | 748..854 | 520 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:59:18 has no hits.
BS24276.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:22 Download gff for
BS24276.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RD | 995..2078 | 17..1100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:06 Download gff for
BS24276.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RD | 995..2078 | 17..1100 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:36 Download gff for
BS24276.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RD | 995..2078 | 17..1100 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:36 Download gff for
BS24276.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9875675..9876223 | 17..565 | 100 | -> | Plus |
| 3R | 9930364..9930545 | 566..747 | 100 | -> | Plus |
| 3R | 9943481..9943587 | 748..854 | 99 | -> | Plus |
| 3R | 9943677..9943894 | 855..1072 | 100 | -> | Plus |
| 3R | 9953773..9953800 | 1073..1100 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:06 Download gff for
BS24276.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5701397..5701945 | 17..565 | 100 | -> | Plus |
| arm_3R | 5756086..5756267 | 566..747 | 100 | -> | Plus |
| arm_3R | 5769203..5769309 | 748..854 | 99 | -> | Plus |
| arm_3R | 5769399..5769616 | 855..1072 | 100 | -> | Plus |
| arm_3R | 5779495..5779522 | 1073..1100 | 100 | | Plus |
BS24276.pep Sequence
Translation from 16 to 1101
> BS24276.pep
MSTGRRLAKRSIIGTKVCAKGPDGLWYSGTISDVKTPPSYSGPLSPPPPP
TFVVPGEAPINADTRYLVRFDFKTAVESPTATTSSAASTSSTSSTDPSVI
VETRRAANVHISPAQALRRSAMIKEFRESDLIGPGFRSIMDTELQPGQRV
YFTYNGREQSGDVVKHDATKDEVIVKITTVGNEEPIELKKRLEEVRLLES
RRSARLADQDRDTDFARLADMSGERRRTTTHSIEVPSQLTAQHNSRKRPP
SDHQDYGNYLETCRAAEILSSMKLQSPHGSMADKCSSPGSSSSASWSSGS
PSPPLSDDGHAHHSPHNIMSPHDADNARTRTASVSTSDEGIVIDYKEERK
KKVSNFSLWTG*
BS24276.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-PD | 361 | CG34360-PD | 1..361 | 1..361 | 1866 | 100 | Plus |
| Glut4EF-PH | 741 | CG34360-PH | 1..356 | 1..356 | 1820 | 99.2 | Plus |
| Glut4EF-PA | 741 | CG34360-PA | 1..356 | 1..356 | 1820 | 99.2 | Plus |
| Glut4EF-PG | 950 | CG34360-PG | 1..356 | 1..356 | 1820 | 99.2 | Plus |
| Glut4EF-PC | 300 | CG34360-PC | 1..288 | 1..288 | 1437 | 97.6 | Plus |
