BS24306.complete Sequence
1064 bp assembled on 2011-02-03
GenBank Submission: KX805692
> BS24306.complete
GAAGTTATCAGTCGACATGCTGGCTCATAACCTAGGTTTCCATAAAAAGC
GCCTTTTTTCAAACATGAAGGCTGTTTTACAGGATCGGGGTGTCATAGGC
TTATCCCTCGAAGAATGCGATTTGGAAAGAACTTTGCTTGGAGGACAGAG
TTTCCGATGGCGATCCATATGCGATGGTAATAGAACGAAATATGGCGGAG
TGGTGTTCAACACCTACTGGGTGCTCCAGCAAGAAGAATCCTTCATAACT
TACGAGGCATACGGAACCAGCAGTCCTTTGGCCACGAAGGACTATTCTTC
CTTGATATCTGACTACCTACGTGTTGATTTCGACCTAAAGGTCAACCAAA
AAGATTGGTTAAGCAAAGATGATAACTTTGTGAAGTTCTTGAGTAAGCCT
GTGCGCCTCCTTTCTCAGGAGCCGTTCGAAAACATTTTTAGCTTCCTTTG
CAGTCAGAACAATAACATCAAGCGCATATCATCTATGATTGAATGGTTTT
GCGCTACATTTGGCACCAAGATTGGTCACTTCAATGGTGCCGATGCGTAT
ACATTTCCCACGATAAATAGATTCCACGACATCCCATGCGAGGATCTTAA
TGCCCAGCTAAGGGCTGCCAAGTTCGGTTATCGGGCCAAGTTCATAGCAC
AAACGCTGCAAGAGATCCAGAAAAAGGGGGGACAAAACTGGTTCATAAGC
CTAAAGAGCATGCCGTTCGAAAAAGCTCGCGAGGAGCTGACACTGCTACC
CGGAATCGGATACAAAGTGGCCGATTGCATCTGCCTTATGTCAATGGGTC
ACTTGGAGTCAGTGCCCGTCGACATTCATATTTACAGAATTGCCCAAAAT
TACTACCTGCCACATCTAACCGGCCAAAAGAACGTAACCAAGAAGATTTA
CGAAGAGGTCTCGAAACATTTTCAAAAGCTACACGGAAAGTATGCCGGTT
GGGCTCAAGCTATTCTCTTTTCTGCCGATTTGAGTCAATTTCAAAATACT
TCCACAGTTGCTTGTAAGAAAAAATCCAATAAAAAACCTAAAAAGTGAAA
GCTTTCTAGACCAT
BS24306.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-RA | 1032 | CG1795-PA | 1..1032 | 17..1048 | 5160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-RA | 1307 | CG1795-RA | 162..1193 | 17..1048 | 5160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8691064..8691551 | 474..961 | 2440 | 100 | Plus |
| X | 23542271 | X | 8690685..8691003 | 156..474 | 1595 | 100 | Plus |
| X | 23542271 | X | 8690488..8690627 | 17..156 | 700 | 100 | Plus |
| X | 23542271 | X | 8691611..8691697 | 962..1048 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:58:35 has no hits.
BS24306.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:21 Download gff for
BS24306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 159..1189 | 17..1047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:37 Download gff for
BS24306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 162..1192 | 17..1047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:13 Download gff for
BS24306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 162..1192 | 17..1047 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:13 Download gff for
BS24306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8690488..8690627 | 17..156 | 100 | -> | Plus |
| X | 8690686..8691003 | 157..474 | 100 | -> | Plus |
| X | 8691065..8691551 | 475..961 | 100 | -> | Plus |
| X | 8691611..8691696 | 962..1047 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:37 Download gff for
BS24306.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8584521..8584660 | 17..156 | 100 | -> | Plus |
| arm_X | 8584719..8585036 | 157..474 | 100 | -> | Plus |
| arm_X | 8585098..8585584 | 475..961 | 100 | -> | Plus |
| arm_X | 8585644..8585729 | 962..1047 | 100 | | Plus |
BS24306.pep Sequence
Translation from 16 to 1047
> BS24306.pep
MLAHNLGFHKKRLFSNMKAVLQDRGVIGLSLEECDLERTLLGGQSFRWRS
ICDGNRTKYGGVVFNTYWVLQQEESFITYEAYGTSSPLATKDYSSLISDY
LRVDFDLKVNQKDWLSKDDNFVKFLSKPVRLLSQEPFENIFSFLCSQNNN
IKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRA
AKFGYRAKFIAQTLQEIQKKGGQNWFISLKSMPFEKAREELTLLPGIGYK
VADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSK
HFQKLHGKYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKK*
BS24306.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-PA | 343 | CG1795-PA | 1..343 | 1..343 | 1821 | 100 | Plus |
