BS24314.complete Sequence
1634 bp assembled on 2011-02-03
GenBank Submission: KX800470
> BS24314.complete
GAAGTTATCAGTCGACATGGTGAACGTAACCATCTACGATGAGGCACCGC
AGCTGAAGCCCAACGAAGTACCCCAAAACATGGCCGCAGGAGCTGATACC
CAACTGGAGCACATGTGCCGTCTGCAGTTCGACTCGCCAGTGCCCCATGT
GCGTCTGTCCGGAATCGTGTGCACCATCGGACCTGCCTCCAGCAGCGTGG
AGATGCTGGAGAAGATGATGGCCACCGGCATGAACATCGCGCGCATGAAC
TTCTCTCACGGATCGCACGAGTACCATGCCGCCACCGTGGCCAATGTGCG
CCAGGCGGTGAAGAACTACTCGGCCAAGCTGGGCTACGAACACCCCGTGG
CCATTGCCCTGGACACCAAGGGGCCCGAGATCCGTACCGGTCTGATCGGA
GGCAGCGGCACCGCCGAGATTGAGCTGAAGAAGGGCGAGAAGATCAAGCT
GACCACCAACAAGGAATTCCTGGAGAAGGGCTCTCTGGAGATTGTGTACG
TGGACTACGAGAACATTGTCAATGTGGTGAAGCCCGGCAACCGGGTGTTC
GTCGATGACGGTCTGATCTCACTGATTGTCCGCGAGGTAGGCAAGGATTC
CCTCACCTGCGAGGTGGAGAACGGCGGCTCTCTGGGTTCCCGCAAGGGTG
TGAACCTGCCAGGCGTGCCCGTCGATCTGCCTGCCGTCTCCGAGAAGGAT
AAGAGCGATCTGCTGTTCGGTGTGGAGCAGGAAGTGGACATGATCTTTGC
TTCGTTCATCCGCAACGCCGCTGCTTTGACCGAGATCCGTAAGGTTCTTG
GCGAGAAGGGCAAGAACATCAAGATCATTTCCAAGATCGAGAACCAGCAG
GGCATGCACAACCTGGACGAGATCATCGAGGCCGGTGATGGCATTATGGT
GGCCCGTGGAGATCTGGGTATTGAGATTCCCGCCGAGAAGGTGTTCCTCG
CCCAGAAGGCCATGATTGCCCGCTGCAACAAGGCTGGCAAGCCTGTGATC
TGCGCCACTCAGATGTTGGAGTCAATGGTGAAGAAGCCACGTCCCACTCG
CGCTGAGATCTCTGATGTGGCCAACGCTGTGCTCGATGGTGCTGATTGCG
TCATGTTGTCTGGTGAGACCGCCAAGGGCGAGTACCCGCTGGAGTGCGTC
CTGACCATGGCCAAGACCTGCAAGGAGGCCGAGGCTGCCCTCTGGCACCA
GAACCTCTTTAACGACTTGGTTCGCGGCGCTGGTACCATCGATGCCTCTC
ACGCGGCTGCCATCGCTGCCGTTGAGGCTGCCACCAAGGCCAAGGCCTCC
GCCATCGTGGTGATCACCACCAGCGGCAAGTCGGCCTTCCAGGTGAGCAA
GTACCGCCCACGCTGCCCCATCATCGCGGTCACCCGTTTCGCGCAGACCG
CCCGACAGGCCCATCTCTACCGTGGACTGGTGCCACTCATCTACAAGGAG
CCCGGTCTTGGTGACTGGCTGAAGGACGTGGACGTGCGCGTGCAGTTCGG
TCTGCAGGTCGGAAAGAAGAACGGCTTCATCAAGACCGGCGATTCCGTCG
TGGTGGTTACCGGCTGGAAGCAGGGCTCCGGCTTCACCAACACCATCCGC
ATTGTCACCGTCGAATAAAAGCTTTCTAGACCAT
BS24314.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:57:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 1602 | CG7070-PA | 1..1602 | 17..1618 | 8010 | 100 | Plus |
PyK-RB | 1539 | CG7070-PB | 1..1539 | 80..1618 | 7695 | 100 | Plus |
CG7069-RA | 2235 | CG7069-PA | 386..944 | 612..1170 | 530 | 73 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-RA | 2109 | CG7070-RA | 243..1845 | 17..1619 | 8015 | 100 | Plus |
PyK-RB | 1958 | CG7070-RB | 132..1694 | 57..1619 | 7815 | 100 | Plus |
CG7069-RA | 2693 | CG7069-RA | 736..1294 | 612..1170 | 530 | 73 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22370776..22372167 | 57..1448 | 6960 | 100 | Plus |
3R | 32079331 | 3R | 22372225..22372382 | 1448..1605 | 790 | 100 | Plus |
3R | 32079331 | 3R | 22373622..22374180 | 612..1170 | 530 | 73 | Plus |
3R | 32079331 | 3R | 14753414..14753603 | 1163..974 | 290 | 76.8 | Minus |
3R | 32079331 | 3R | 22369524..22369565 | 17..58 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:57:55 has no hits.
BS24314.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:19 Download gff for
BS24314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 317..1916 | 17..1616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:40:12 Download gff for
BS24314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 243..1842 | 17..1616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:54 Download gff for
BS24314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PyK-RA | 243..1842 | 17..1616 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:54 Download gff for
BS24314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22369524..22369565 | 17..58 | 100 | -> | Plus |
3R | 22370778..22372167 | 59..1448 | 100 | -> | Plus |
3R | 22372226..22372384 | 1449..1611 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:40:12 Download gff for
BS24314.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18195246..18195287 | 17..58 | 100 | -> | Plus |
arm_3R | 18196500..18197889 | 59..1448 | 100 | -> | Plus |
arm_3R | 18197948..18198106 | 1449..1611 | 97 | | Plus |
BS24314.pep Sequence
Translation from 16 to 1617
> BS24314.pep
MVNVTIYDEAPQLKPNEVPQNMAAGADTQLEHMCRLQFDSPVPHVRLSGI
VCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKN
YSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKE
FLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLISLIVREVGKDSLTCEV
ENGGSLGSRKGVNLPGVPVDLPAVSEKDKSDLLFGVEQEVDMIFASFIRN
AAALTEIRKVLGEKGKNIKIISKIENQQGMHNLDEIIEAGDGIMVARGDL
GIEIPAEKVFLAQKAMIARCNKAGKPVICATQMLESMVKKPRPTRAEISD
VANAVLDGADCVMLSGETAKGEYPLECVLTMAKTCKEAEAALWHQNLFND
LVRGAGTIDASHAAAIAAVEAATKAKASAIVVITTSGKSAFQVSKYRPRC
PIIAVTRFAQTARQAHLYRGLVPLIYKEPGLGDWLKDVDVRVQFGLQVGK
KNGFIKTGDSVVVVTGWKQGSGFTNTIRIVTVE*
BS24314.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PyK-PA | 533 | CG7070-PA | 1..533 | 1..533 | 2706 | 100 | Plus |
PyK-PB | 512 | CG7070-PB | 1..512 | 22..533 | 2595 | 100 | Plus |
CG2964-PA | 554 | CG2964-PA | 14..513 | 28..530 | 1268 | 47.8 | Plus |
CG7069-PA | 744 | CG7069-PA | 1..461 | 72..532 | 1257 | 56.4 | Plus |
CG7362-PB | 793 | CG7362-PB | 109..413 | 212..514 | 704 | 49.8 | Plus |